C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 237
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038079 Tmem237 10090 - 1:59100590-59120408 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087475 Tmem237-003 59100597-59119806 protein_coding
  ENSMUST00000094917 Tmem237-001 59100590-59120094 protein_coding
  ENSMUST00000185951 Tmem237-006 59108784-59114316 retained_intron
  ENSMUST00000186395 Tmem237-005 59109090-59120408 protein_coding
  ENSMUST00000186794 Tmem237-002 59100911-59120382 protein_coding
  ENSMUST00000186820 Tmem237-007 59109871-59115958 retained_intron
  ENSMUST00000190014 Tmem237-004 59108195-59120112 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000087475ENSMUST00000094917ENSMUST00000186794
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000087475 5.762±1.05 2.201±0.00 7.547±1.52 8.504±2.34 5.344±0.00 1.578±0.09 N/A 6.701±0.97 4.056±0.42 7.290±0.48 4.978±1.00 4.533±0.00 6.928±0.00
ENSMUST00000094917 N/A 2.533±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186794 N/A 2.667±0.00 N/A 8.819±0.00 3.934±0.11 N/A 1.627±0.31 6.289±0.00 N/A N/A 4.989±0.00 N/A 9.278±2.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0002 VISTA 1:58652904-59256413
CIL_0009CR CIL_0009CR_0002 VISTA 1:59040862-59642046
CIL_00020P CIL_00020P_0002 CGP 1:59050506-59120408
CIL_00020O CIL_00020O_0002 CGP 1:59100590-59163389

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030111 IMP regulation of Wnt signaling pathway
GO:0035869 IDA ciliary transition zone
GO:0042384 IMP cilium assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041735 tmem237a transmembrane protein 237a protein_coding Danio_rerio
ENSDARG00000074248 tmem237b transmembrane protein 237b protein_coding Danio_rerio
ENSG00000155755 TMEM237 transmembrane protein 237 protein_coding Homo_sapiens

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