C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule associated monooxygenase, calponin and LIM domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106647 Mical2-002 ENSMUSG00000038244 10090 + 7:112225890-112315415 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000106647
Transcript ID Muscle
ENSMUST00000106647 8.108±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T3 CIL_0008T3_0002 VISTA 7:111980454-112581088
CIL_0008YS CIL_0008YS_0002 VISTA 7:111997825-112599422
CIL_0007SQ CIL_0007SQ_0002 VISTA 7:112051476-112653289
CIL_0004J2 CIL_0004J2_0002 CGP 7:112116019-112355194
CIL_0004J1 CIL_0004J1_0002 CGP 7:112225856-112413104

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000139013 mical2b-001 protein_coding Danio_rerio 0 473
ENSDART00000141994 mical2b-002 protein_coding Danio_rerio 0 473
ENSDART00000109672 mical2b-201 protein_coding Danio_rerio 0 390
ENST00000256194 MICAL2-001 protein_coding Homo_sapiens 0 1092
ENST00000342902 MICAL2-201 protein_coding Homo_sapiens 0 1092
ENST00000379612 MICAL2-202 protein_coding Homo_sapiens 0 1092
ENST00000524685 MICAL2-023 protein_coding Homo_sapiens 0 427
ENST00000525119 MICAL2-024 protein_coding Homo_sapiens 0 473
ENST00000527195 MICAL2-019 processed_transcript Homo_sapiens 0 433
ENST00000527546 MICAL2-007 protein_coding Homo_sapiens 0 1092
ENST00000528931 MICAL2-006 retained_intron Homo_sapiens 0 1068
ENST00000531732 MICAL2-002 retained_intron Homo_sapiens 0 708
ENST00000537344 MICAL2-203 protein_coding Homo_sapiens 0 1092

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