C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LIM and SH3 protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038366 Lasp1 10090 + 11:97799000-97838764 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043843 Lasp1-001 97799565-97838764 protein_coding
  ENSMUST00000107568 Lasp1-015 97833424-97834384 retained_intron
  ENSMUST00000107569 Lasp1-017 97799672-97807319 retained_intron
  ENSMUST00000127033 Lasp1-016 97801998-97824910 protein_coding
  ENSMUST00000127575 Lasp1-014 97833183-97836205 retained_intron
  ENSMUST00000129558 Lasp1-005 97799838-97833607 protein_coding
  ENSMUST00000129828 Lasp1-010 97800334-97833683 protein_coding
  ENSMUST00000134428 Lasp1-009 97800303-97806919 protein_coding
  ENSMUST00000136723 Lasp1-008 97800297-97824908 protein_coding
  ENSMUST00000138919 Lasp1-012 97806310-97806900 protein_coding
  ENSMUST00000143571 Lasp1-004 97799000-97806839 protein_coding
  ENSMUST00000146572 Lasp1-007 97800171-97833563 protein_coding
  ENSMUST00000148280 Lasp1-011 97805192-97836119 protein_coding
  ENSMUST00000152962 Lasp1-006 97799998-97833595 protein_coding
  ENSMUST00000153520 Lasp1-003 97806502-97815782 protein_coding
  ENSMUST00000155762 Lasp1-013 97815248-97824949 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043843
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043843 61.218±11.41 64.682±4.68 44.587±1.69 36.047±4.11 65.302±18.13 114.060±3.28 11.421±0.77 43.554±2.01 28.307±9.62 52.947±7.28 4.475±0.98 41.107±15.02 109.028±40.02 8.636±3.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QO CIL_0006QO_0002 CGP 11:97777527-97838764

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005925 IDA focal adhesion
GO:0006811 ISS ion transport
GO:0008270 IEA zinc ion binding
GO:0015075 ISS ion transmembrane transporter activity
GO:0030864 ISS cortical actin cytoskeleton
GO:0034220 IEA ion transmembrane transport
GO:0051015 IDA actin filament binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057867 lasp1 LIM and SH3 protein 1 protein_coding Danio_rerio
ENSG00000002834 LASP1 LIM and SH3 protein 1 protein_coding Homo_sapiens

Loading