C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006QO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125691-ENSG00000002834 CGP 9606 17:38847865-38921770
GeneTranscriptPositionBiotype
ENSG00000002834 (LASP1)
LIM and SH3 protein 1 		ENST00000318008 (LASP1-001) 38869859-38921770 protein_coding
ENST00000419929 (LASP1-002) 38873890-38915141 protein_coding
ENST00000433206 (LASP1-201) 38869859-38921769 protein_coding
ENST00000435347 (LASP1-202) 38870143-38921761 protein_coding
ENST00000443937 (LASP1-005) 38870061-38919175 nonsense_mediated_decay
ENST00000579123 (LASP1-008) 38914397-38916837 protein_coding
ENST00000581485 (LASP1-009) 38890234-38915129 retained_intron
ENST00000584106 (LASP1-004) 38870061-38899200 retained_intron
ENST00000585841 (LASP1-003) 38870031-38919326 nonsense_mediated_decay
ENSG00000125691 (RPL23)
ribosomal protein L23 		ENST00000245857 (RPL23-004) 38850081-38853428 protein_coding
ENST00000378096 (RPL23-006) 38850439-38853629 protein_coding
ENST00000394332 (RPL23-003) 38847865-38853722 protein_coding
ENST00000394333 (RPL23-002) 38847865-38853735 protein_coding
ENST00000470646 (RPL23-005) 38850422-38853424 protein_coding
ENST00000479035 (RPL23-001) 38847867-38853843 protein_coding
ENST00000577407 (RPL23-010) 38850114-38853737 protein_coding
ENST00000577760 (RPL23-007) 38850684-38853764 retained_intron
ENST00000584056 (RPL23-009) 38852598-38853738 retained_intron
ENST00000584583 (RPL23-011) 38850086-38850661 retained_intron
ENST00000584912 (RPL23-008) 38850081-38853740 retained_intron
ENSG00000244086 (RPS20P35)
ribosomal protein S20 pseudogene 35 		ENST00000462007 (RPS20P35-001) 38855314-38855670 processed_pseudogene
ENSG00000263466 (RP1-56K13.2)
 ENST00000581083 (RP1-56K13.2-001) 38903704-38904600 antisense
ENSG00000265784 (RP1-56K13.3)
 ENST00000580121 (RP1-56K13.3-001) 38918801-38921769 antisense
ENSG00000277057 (MIR6779)
microRNA 6779 		ENST00000617283 (MIR6779-201) 38914979-38915042 miRNA
CIL_0006QO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071415-ENSMUSG00000038366 CGP 10090 11:97777527-97838764
GeneTranscriptPositionBiotype
ENSMUSG00000038366 (Lasp1)
LIM and SH3 protein 1 		ENSMUST00000043843 (Lasp1-001) 97799565-97838764 protein_coding
ENSMUST00000107568 (Lasp1-015) 97833424-97834384 retained_intron
ENSMUST00000107569 (Lasp1-017) 97799672-97807319 retained_intron
ENSMUST00000127033 (Lasp1-016) 97801998-97824910 protein_coding
ENSMUST00000127575 (Lasp1-014) 97833183-97836205 retained_intron
ENSMUST00000129558 (Lasp1-005) 97799838-97833607 protein_coding
ENSMUST00000129828 (Lasp1-010) 97800334-97833683 protein_coding
ENSMUST00000134428 (Lasp1-009) 97800303-97806919 protein_coding
ENSMUST00000136723 (Lasp1-008) 97800297-97824908 protein_coding
ENSMUST00000138919 (Lasp1-012) 97806310-97806900 protein_coding
ENSMUST00000143571 (Lasp1-004) 97799000-97806839 protein_coding
ENSMUST00000146572 (Lasp1-007) 97800171-97833563 protein_coding
ENSMUST00000148280 (Lasp1-011) 97805192-97836119 protein_coding
ENSMUST00000152962 (Lasp1-006) 97799998-97833595 protein_coding
ENSMUST00000153520 (Lasp1-003) 97806502-97815782 protein_coding
ENSMUST00000155762 (Lasp1-013) 97815248-97824949 protein_coding
ENSMUSG00000064901 (Snora21)
small nucleolar RNA, H/ACA box 21 		ENSMUST00000082967 (Snora21-201) 97781639-97781775 snoRNA
ENSMUSG00000071415 (Rpl23)
ribosomal protein L23 		ENSMUST00000103146 (Rpl23-001) 97777527-97782437 protein_coding
ENSMUST00000128801 (Rpl23-004) 97781404-97782382 protein_coding
ENSMUST00000150955 (Rpl23-005) 97778056-97778635 processed_transcript
ENSMUST00000151118 (Rpl23-002) 97778038-97782276 processed_transcript
ENSMUST00000151965 (Rpl23-003) 97781362-97782362 processed_transcript
ENSMUSG00000098813 (Gm27326)
predicted gene, 27326 		ENSMUST00000183504 (Gm27326-201) 97780182-97780276 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QO_0001ENSG00000002834ENST00000318008ENST00000419929ENST00000433206ENST00000435347ENST00000443937ENST00000579123ENST00000581485ENST00000584106ENST00000585841ENSG00000125691ENST00000245857ENST00000378096ENST00000394332ENST00000394333ENST00000470646ENST00000479035ENST00000577407ENST00000577760ENST00000584056ENST00000584583ENST00000584912ENSG00000244086ENST00000462007ENSG00000263466ENST00000581083ENSG00000265784ENST00000580121ENSG00000277057ENST00000617283CIL_0006QO_0002ENSMUSG00000038366ENSMUST00000043843ENSMUST00000107568ENSMUST00000107569ENSMUST00000127033ENSMUST00000127575ENSMUST00000129558ENSMUST00000129828ENSMUST00000134428ENSMUST00000136723ENSMUST00000138919ENSMUST00000143571ENSMUST00000146572ENSMUST00000148280ENSMUST00000152962ENSMUST00000153520ENSMUST00000155762ENSMUSG00000064901ENSMUST00000082967ENSMUSG00000071415ENSMUST00000103146ENSMUST00000128801ENSMUST00000150955ENSMUST00000151118ENSMUST00000151965ENSMUSG00000098813ENSMUST00000183504
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QO_0001ENSG00000002834ENST00000318008ENST00000419929ENST00000433206ENST00000435347ENST00000443937ENST00000584106ENSG00000125691ENST00000245857ENST00000394332ENST00000470646ENST00000479035ENST00000577407ENSG00000244086ENST00000462007ENSG00000263466ENST00000581083ENSG00000265784ENST00000580121ENSG00000277057ENST00000617283CIL_0006QO_0002ENSMUSG00000038366ENSMUST00000043843ENSMUSG00000064901ENSMUST00000082967ENSMUSG00000071415ENSMUST00000103146ENSMUST00000151118ENSMUSG00000098813ENSMUST00000183504
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000002834 ENST00000318008 14.304±0.00 47.946±0.00 2.033±0.00 15.104±11.75 19.065±10.34 9.404±0.00 3.111±1.49 6.797±5.30 6.090±2.51 11.362±9.10 2.976±1.84 45.837±23.75 49.615±8.56 18.142±14.18
ENST00000419929 N/A N/A 2.350±0.00 4.795±0.00 N/A N/A N/A N/A 5.326±0.00 N/A N/A 10.016±0.00 N/A 24.718±0.00
ENST00000433206 12.673±0.00 18.800±0.00 N/A N/A N/A 7.223±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435347 N/A N/A 1.093±0.00 2.006±0.00 N/A 2.152±0.00 0.503±0.00 3.795±0.00 1.888±0.00 4.100±0.00 0.230±0.00 16.823±8.32 15.880±4.29 2.083±0.00
ENST00000443937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.414±0.00 N/A
ENST00000579123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584106 N/A N/A 1.928±0.00 N/A N/A N/A N/A N/A N/A 3.602±0.00 2.433±0.00 64.023±0.00 35.822±0.00 N/A
ENST00000585841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000125691 ENST00000245857 717.789±0.00 678.159±0.00 N/A 108.662±92.23 249.343±212.67 410.058±379.60 234.164±0.00 215.627±181.94 156.865±98.94 391.942±354.38 543.746±0.00 3392.567±2627.09 1456.718±1236.59 665.860±160.83
ENST00000378096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394332 211.655±0.00 256.022±0.00 48.194±0.00 57.860±14.02 143.523±27.92 129.927±40.37 65.320±7.12 102.985±3.06 115.878±62.78 144.121±34.43 105.955±24.94 704.044±381.80 374.312±92.09 122.076±0.00
ENST00000394333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470646 318.829±0.00 376.623±0.00 N/A 110.408±0.00 463.868±0.00 438.590±0.00 N/A N/A 117.145±0.00 435.797±0.00 239.250±0.00 N/A N/A 330.852±0.00
ENST00000479035 N/A N/A N/A 2.577±0.00 N/A N/A 2.654±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000577407 N/A N/A 24.822±0.00 N/A N/A 37.125±0.00 N/A N/A N/A N/A 16.541±0.00 84.446±0.00 N/A 175.114±0.00
ENST00000577760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000244086 ENST00000462007 0.078±0.00 0.083±0.00 N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A 0.352±0.00 0.634±0.17
ENSG00000263466 ENST00000581083 0.660±0.00 2.076±0.00 N/A 1.909±0.00 0.653±0.00 0.880±0.00 0.212±0.00 1.308±0.00 0.445±0.18 0.387±0.17 0.953±0.12 0.563±0.33 0.311±0.00 0.499±0.16
ENSG00000265784 ENST00000580121 N/A N/A N/A N/A N/A 39.994±0.00 17.154±0.00 35.525±0.00 49.951±0.00 66.036±0.00 6.176±0.00 N/A 61.559±7.40 N/A
ENSG00000277057 ENST00000617283 N/A N/A N/A N/A N/A 0.723±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038366 ENSMUST00000043843 61.218±11.41 64.682±4.68 44.587±1.69 36.047±4.11 65.302±18.13 114.060±3.28 11.421±0.77 43.554±2.01 28.307±9.62 52.947±7.28 4.475±0.98 41.107±15.02 109.028±40.02 8.636±3.45
ENSMUST00000107568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000107569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000064901 ENSMUST00000082967 1796.000±0.00 N/A 8.072±1.13 21.564±3.56 1540.553±682.89 N/A N/A 843.750±0.00 18.218±12.93 N/A 2.487±0.00 21.147±8.64 23.933±22.39 342.388±329.56
ENSMUSG00000071415 ENSMUST00000103146 89.309±35.06 21.344±2.07 69.939±16.23 154.837±7.50 70.500±23.58 92.925±11.82 64.179±11.32 107.327±14.75 211.056±204.06 81.096±6.50 68.396±21.41 85.682±74.17 179.136±126.77 63.598±30.41
ENSMUST00000128801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151118 N/A N/A 112.741±25.48 70.196±36.54 49.299±0.00 N/A 10.111±0.00 N/A 120.004±0.00 N/A 150.461±32.29 702.131±128.55 329.445±219.57 187.514±0.00
ENSMUST00000151965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000098813 ENSMUST00000183504 N/A N/A N/A N/A N/A 10739.070±2693.73 N/A N/A 516.226±0.00 3493.230±0.00 N/A 1455.976±775.84 1081.471±283.80 N/A

Loading