C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | LIM and SH3 protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000143571  |
Lasp1-004 |
ENSMUSG00000038366 |
10090 | + |
11:97799000-97806839  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006QO | CIL_0006QO_0002 | CGP | 11:97777527-97838764 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0005925 | IDA | focal adhesion |
| GO:0008270 | IEA | zinc ion binding |
| GO:0051015 | IDA | actin filament binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000318008
|
LASP1-001 | protein_coding | Homo_sapiens | 0 | 259 |
|
ENST00000433206
|
LASP1-201 | protein_coding | Homo_sapiens | 0 | 259 |
|
ENST00000435347
|
LASP1-202 | protein_coding | Homo_sapiens | 2e-40 | 172 |
|
ENST00000443937
|
LASP1-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 209 |
|
ENST00000584106
|
LASP1-004 | retained_intron | Homo_sapiens | 0 | 209 |
|
ENST00000585841
|
LASP1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 259 |
