C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SOGA family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038916 Soga3 10090 + 10:29143996-29199630 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000092629 Soga3-201 29143996-29199630 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000092629
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000092629 0.017±0.01 0.945±0.30 0.122±0.01 27.618±4.25 0.018±0.01 0.411±0.06 0.021±0.02 0.039±0.01 0.033±0.03 0.022±0.00 0.011±0.00 0.029±0.01 0.076±0.09 0.051±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EL CIL_0001EL_0003 CGP 10:29143996-29230779

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005615 IEA extracellular space
GO:0008150 ND biological_process
GO:0010506 IEA regulation of autophagy
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063311 soga3a SOGA family member 3a protein_coding Danio_rerio
ENSDARG00000075455 soga3b SOGA family member 3b protein_coding Danio_rerio
ENSG00000214338 SOGA3 SOGA family member 3 protein_coding Homo_sapiens
ENSG00000255330 SOGA3 SOGA family member 3 protein_coding Homo_sapiens

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