C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rab geranylgeranyl transferase, b subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038975 Rabggtb 10090 - 3:153907289-153912966 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000089950 Rabggtb-201 153907289-153912966 protein_coding
  ENSMUST00000167111 Rabggtb-202 153907289-153912203 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089950ENSMUST00000167111
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089950 7.996±2.55 11.788±2.38 16.068±1.09 20.947±3.12 8.386±1.47 8.412±1.13 16.863±6.49 22.012±4.04 29.788±18.90 6.309±2.00 15.636±4.56 16.378±10.06 29.949±10.67 2.995±0.81
ENSMUST00000167111 N/A 2.305±0.00 N/A N/A 3.221±0.00 N/A N/A N/A 7.036±3.12 1.967±0.00 N/A 4.319±0.72 6.625±5.19 0.581±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZQ CIL_0002ZQ_0002 CGP 3:153907289-153944632

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004663 IEA Rab geranylgeranyltransferase activity
GO:0005515 IEA protein binding
GO:0005968 ISS Rab-protein geranylgeranyltransferase complex
GO:0008270 ISS zinc ion binding
GO:0017137 ISS Rab GTPase binding
GO:0018344 IEA protein geranylgeranylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068587 rabggtb Rab geranylgeranyltransferase, beta subunit protein_coding Danio_rerio
ENSG00000137955 RABGGTB Rab geranylgeranyltransferase, beta subunit protein_coding Homo_sapiens

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