C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002ZQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000068587-ENSDARG00000038900 CGP 7955 2:26611284-26624320
GeneTranscriptPositionBiotype
ENSDARG00000038900 (acadm)
acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain
ENSDART00000132125 (acadm-001) 26618240-26624320 protein_coding
ENSDART00000135585 (acadm-003) 26620829-26621679 retained_intron
ENSDART00000139683 (acadm-004) 26622883-26624260 retained_intron
ENSDART00000145262 (acadm-002) 26619319-26624200 protein_coding
ENSDARG00000068587 (rabggtb)
Rab geranylgeranyltransferase, beta subunit
ENSDART00000099247 (rabggtb-002) 26611284-26617235 protein_coding
ENSDART00000099248 (rabggtb-001) 26611290-26617263 protein_coding
ENSDART00000134495 (rabggtb-003) 26612053-26616163 protein_coding
CIL_0002ZQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038975-ENSMUSG00000062908 CGP 10090 3:153907289-153944632
GeneTranscriptPositionBiotype
ENSMUSG00000038975 (Rabggtb)
Rab geranylgeranyl transferase, b subunit
ENSMUST00000089950 (Rabggtb-201) 153907289-153912966 protein_coding
ENSMUST00000167111 (Rabggtb-202) 153907289-153912203 protein_coding
ENSMUSG00000062908 (Acadm)
acyl-Coenzyme A dehydrogenase, medium chain
ENSMUST00000072697 (Acadm-001) 153922357-153944632 protein_coding
ENSMUST00000130713 (Acadm-006) 153938657-153941903 retained_intron
ENSMUST00000135724 (Acadm-002) 153941602-153944463 retained_intron
ENSMUST00000137161 (Acadm-005) 153938295-153944442 retained_intron
ENSMUST00000150070 (Acadm-004) 153936365-153944446 protein_coding
ENSMUST00000156310 (Acadm-003) 153936311-153944467 nonsense_mediated_decay
ENSMUSG00000064731 (Snord45b)
small nucleolar RNA, C/D box 45B
ENSMUST00000082797 (Snord45b-201) 153910563-153910633 snoRNA
ENSMUSG00000065738 (Gm24494)
predicted gene, 24494
ENSMUST00000083804 (Gm24494-201) 153911610-153911690 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ZQ_0001ENSDARG00000038900ENSDART00000132125ENSDART00000135585ENSDART00000139683ENSDART00000145262ENSDARG00000068587ENSDART00000099247ENSDART00000099248ENSDART00000134495CIL_0002ZQ_0002ENSMUSG00000038975ENSMUST00000089950ENSMUST00000167111ENSMUSG00000062908ENSMUST00000072697ENSMUST00000130713ENSMUST00000135724ENSMUST00000137161ENSMUST00000150070ENSMUST00000156310ENSMUSG00000064731ENSMUST00000082797ENSMUSG00000065738ENSMUST00000083804
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ZQ_0001ENSDARG00000038900ENSDART00000132125ENSDART00000135585ENSDARG00000068587ENSDART00000099247ENSDART00000099248ENSDART00000134495CIL_0002ZQ_0002ENSMUSG00000038975ENSMUST00000089950ENSMUST00000167111ENSMUSG00000062908ENSMUST00000072697ENSMUST00000156310ENSMUSG00000064731ENSMUST00000082797ENSMUSG00000065738ENSMUST00000083804
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000038900 ENSDART00000132125 N/A N/A N/A 50.741±27.03 N/A N/A 284.809±203.40 182.503±0.00 12.066±0.00 N/A 188.456±0.00 N/A N/A N/A
ENSDART00000135585 N/A N/A N/A N/A N/A N/A 105.063±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000068587 ENSDART00000099247 N/A N/A N/A 6.388±0.79 N/A N/A 7.661±0.00 6.022±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000099248 N/A N/A N/A 12.464±1.09 N/A N/A 5.414±0.09 8.340±0.00 0.194±0.00 N/A 1.977±0.00 N/A N/A N/A
ENSDART00000134495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.875±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038975 ENSMUST00000089950 7.996±2.55 11.788±2.38 16.068±1.09 20.947±3.12 8.386±1.47 8.412±1.13 16.863±6.49 22.012±4.04 29.788±18.90 6.309±2.00 15.636±4.56 16.378±10.06 29.949±10.67 2.995±0.81
ENSMUST00000167111 N/A 2.305±0.00 N/A N/A 3.221±0.00 N/A N/A N/A 7.036±3.12 1.967±0.00 N/A 4.319±0.72 6.625±5.19 0.581±0.08
ENSMUSG00000062908 ENSMUST00000072697 48.489±22.11 39.667±13.52 39.966±2.85 11.161±2.11 46.330±4.45 15.173±3.35 252.704±26.55 181.581±27.13 74.869±50.70 19.130±7.46 123.574±10.08 23.374±23.86 56.222±15.01 4.462±1.84
ENSMUST00000130713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156310 N/A N/A N/A N/A N/A 8.775±0.00 N/A N/A N/A N/A N/A N/A N/A 1.455±0.00
ENSMUSG00000064731 ENSMUST00000082797 65106.500±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4697.050±0.00 N/A
ENSMUSG00000065738 ENSMUST00000083804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 111.582±0.00 901.498±0.00 N/A

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