C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039037 St6galnac5 10090 - 3:152817081-152982246 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044278 St6galnac5-001 152817081-152982246 protein_coding
  ENSMUST00000161757 St6galnac5-002 152975374-152982052 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungOvaryENSMUST00000044278ENSMUST00000161757
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Ovary
ENSMUST00000044278 1.195±0.14 1.398±0.10 8.365±0.59 2.801±1.25 0.737±0.12 0.903±0.02 0.782±0.12 1.047±0.31
ENSMUST00000161757 N/A N/A N/A 9.999±0.30 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00048N CIL_00048N_0002 CGP 3:152462815-152980408
CIL_00048M CIL_00048M_0002 CGP 3:152714100-152982246
CIL_0002A5 CIL_0002A5_0002 CGP 3:152817081-153725062

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001665 IDA alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity
GO:0006486 IEA protein glycosylation
GO:0006688 IDA glycosphingolipid biosynthetic process
GO:0008373 IEA:IDA sialyltransferase activity
GO:0009312 IDA oligosaccharide biosynthetic process
GO:0030173 IEA integral component of Golgi membrane
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039220 st6galnac5a ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a protein_coding Danio_rerio
ENSG00000117069 ST6GALNAC5 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein_coding Homo_sapiens

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