C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00048N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000012555-ENSDARG00000024479 CGP 7955 2:8630181-8922838
GeneTranscriptPositionBiotype
ENSDARG00000012555 (ak5)
adenylate kinase 5 		ENSDART00000022768 (ak5-001) 8630181-8844296 protein_coding
ENSDARG00000024479 (pigk)
phosphatidylinositol glycan, class K 		ENSDART00000028906 (pigk-001) 8846226-8922838 protein_coding
ENSDARG00000087079 (CR450828.1)
 ENSDART00000122685 (CR450828.1-201) 8680562-8680640 miRNA

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00048N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039058-ENSMUSG00000039047 CGP 10090 3:152462815-152980408
GeneTranscriptPositionBiotype
ENSMUSG00000039037 (St6galnac5)
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 		ENSMUST00000044278 (St6galnac5-001) 152817081-152982246 protein_coding
ENSMUST00000161757 (St6galnac5-002) 152975374-152982052 processed_transcript
ENSMUSG00000039047 (Pigk)
phosphatidylinositol glycan anchor biosynthesis, class K 		ENSMUST00000045029 (Pigk-002) 152714113-152785922 protein_coding
ENSMUST00000051510 (Pigk-004) 152738262-152785848 processed_transcript
ENSMUST00000159045 (Pigk-008) 152738043-152740196 processed_transcript
ENSMUST00000159899 (Pigk-001) 152714100-152788898 protein_coding
ENSMUST00000160651 (Pigk-007) 152763381-152766524 processed_transcript
ENSMUST00000161596 (Pigk-005) 152714120-152980408 nonsense_mediated_decay
ENSMUST00000162642 (Pigk-006) 152714113-152842921 nonsense_mediated_decay
ENSMUST00000162835 (Pigk-003) 152714106-152741164 retained_intron
ENSMUSG00000039058 (Ak5)
adenylate kinase 5 		ENSMUST00000045262 (Ak5-201) 152462815-152668140 protein_coding
ENSMUSG00000039068 (Zzz3)
zinc finger, ZZ domain containing 3 		ENSMUST00000089982 (Zzz3-002) 152396684-152459477 protein_coding
ENSMUST00000106100 (Zzz3-001) 152396003-152462826 protein_coding
ENSMUST00000106101 (Zzz3-201) 152396694-152462826 protein_coding
ENSMUST00000106103 (Zzz3-003) 152395473-152459474 protein_coding
ENSMUST00000135044 (Zzz3-005) 152457417-152458535 processed_transcript
ENSMUST00000138115 (Zzz3-004) 152395525-152427620 processed_transcript
ENSMUST00000150802 (Zzz3-006) 152396032-152449128 processed_transcript
ENSMUSG00000090017 (Gm16213)
predicted gene 16213 		ENSMUST00000160076 (Gm16213-001) 152920240-152921399 antisense
ENSMUSG00000090040 (Gm16232)
predicted gene 16232 		ENSMUST00000162856 (Gm16232-001) 152876051-152876217 processed_pseudogene
ENSMUSG00000090095 (Rpl29-ps1)
ribosomal protein L29, pseudogene 1 		ENSMUST00000161849 (Rpl29-ps1-001) 152780774-152782061 processed_pseudogene
ENSMUSG00000090163 (Gm16231)
predicted gene 16231 		ENSMUST00000160432 (Gm16231-001) 152943313-152943944 antisense

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048N_0001ENSDARG00000012555ENSDART00000022768ENSDARG00000024479ENSDART00000028906ENSDARG00000087079ENSDART00000122685CIL_00048N_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048N_0001ENSDARG00000012555ENSDART00000022768ENSDARG00000024479ENSDART00000028906ENSDARG00000087079ENSDART00000122685CIL_00048N_0002ENSMUSG00000039037ENSMUST00000044278ENSMUST00000161757ENSMUSG00000039047ENSMUST00000045029ENSMUST00000051510ENSMUST00000159899ENSMUST00000161596ENSMUST00000162835ENSMUSG00000039058ENSMUST00000045262ENSMUSG00000039068ENSMUST00000089982ENSMUST00000106100ENSMUST00000106101ENSMUST00000106103ENSMUST00000150802ENSMUSG00000090017ENSMUST00000160076ENSMUSG00000090040ENSMUST00000162856ENSMUSG00000090095ENSMUST00000161849ENSMUSG00000090163ENSMUST00000160432
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012555 ENSDART00000022768 N/A N/A N/A 49.602±17.30 N/A N/A 0.144±0.07 1.104±0.00 0.016±0.00 N/A 2.684±0.00 N/A N/A N/A
ENSDARG00000024479 ENSDART00000028906 N/A N/A N/A 2.629±1.52 N/A N/A 2.269±0.70 2.973±0.83 0.211±0.00 N/A 0.596±0.00 N/A N/A N/A
ENSDARG00000087079 ENSDART00000122685 N/A N/A N/A N/A N/A N/A 462.343±450.47 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039037 ENSMUST00000044278 1.195±0.14 1.398±0.10 N/A 8.365±0.59 2.801±1.25 0.737±0.12 N/A 0.903±0.02 N/A 0.782±0.12 N/A 1.047±0.31 N/A N/A
ENSMUST00000161757 N/A N/A N/A N/A 9.999±0.30 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039047 ENSMUST00000045029 8.835±2.40 6.215±1.51 3.261±0.00 N/A 4.372±0.70 3.267±0.61 2.240±0.20 5.640±0.71 5.526±1.56 3.624±1.12 N/A 5.111±1.23 4.214±1.00 9.307±3.71
ENSMUST00000051510 N/A N/A 3.456±0.56 29.392±0.00 N/A N/A N/A N/A 3.127±1.02 N/A N/A 16.821±7.59 13.942±8.90 14.857±0.00
ENSMUST00000159045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159899 4.166±1.04 4.643±2.00 1.310±0.14 4.989±2.05 1.468±0.38 2.570±0.81 1.141±0.21 2.647±0.11 1.530±0.34 2.965±0.85 3.181±1.07 3.520±2.39 2.048±0.60 1.205±0.27
ENSMUST00000160651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.012±0.16
ENSMUST00000162642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162835 N/A 7.004±0.82 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039058 ENSMUST00000045262 N/A N/A N/A 51.491±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039068 ENSMUST00000089982 2.528±0.53 N/A N/A N/A 1.696±0.06 N/A 0.587±0.00 N/A 1.254±0.53 N/A 0.965±0.33 8.203±2.47 7.305±3.63 2.851±0.00
ENSMUST00000106100 3.700±0.42 2.400±1.41 2.777±0.05 6.890±2.38 1.084±0.16 1.919±1.13 1.444±0.43 3.162±0.79 1.860±0.77 2.213±1.11 0.817±0.26 5.672±0.98 3.307±1.56 0.673±0.00
ENSMUST00000106101 N/A N/A 3.569±0.03 3.218±0.56 2.018±0.00 0.850±0.00 0.749±0.00 N/A 1.142±0.57 N/A 0.570±0.07 7.086±0.26 1.756±0.12 1.354±0.00
ENSMUST00000106103 3.865±1.96 4.460±1.02 3.126±0.30 3.356±0.00 3.219±0.55 2.971±0.33 1.304±0.25 2.929±0.00 3.187±1.36 2.852±0.00 N/A 5.753±1.28 6.012±1.18 4.120±0.62
ENSMUST00000135044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.524±0.00
ENSMUSG00000090017 ENSMUST00000160076 0.095±0.00 0.230±0.00 0.044±0.00 N/A N/A N/A 0.064±0.00 0.081±0.00 0.048±0.01 N/A N/A N/A 0.068±0.00 0.071±0.01
ENSMUSG00000090040 ENSMUST00000162856 N/A N/A N/A 2.395±0.10 134.286±14.87 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090095 ENSMUST00000161849 0.135±0.07 0.201±0.01 0.076±0.01 0.023±0.00 N/A 0.277±0.11 0.245±0.05 0.140±0.05 0.117±0.07 0.276±0.08 N/A 0.275±0.13 0.034±0.02 0.148±0.09
ENSMUSG00000090163 ENSMUST00000160432 N/A N/A N/A N/A N/A N/A N/A 0.222±0.00 N/A N/A N/A N/A N/A 2.164±1.37

Loading