C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatidylinositol glycan anchor biosynthesis, class K
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039047 Pigk 10090 + 3:152714100-152980408 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045029 Pigk-002 152714113-152785922 protein_coding
  ENSMUST00000051510 Pigk-004 152738262-152785848 processed_transcript
  ENSMUST00000159045 Pigk-008 152738043-152740196 processed_transcript
  ENSMUST00000159899 Pigk-001 152714100-152788898 protein_coding
  ENSMUST00000160651 Pigk-007 152763381-152766524 processed_transcript
  ENSMUST00000161596 Pigk-005 152714120-152980408 nonsense_mediated_decay
  ENSMUST00000162642 Pigk-006 152714113-152842921 nonsense_mediated_decay
  ENSMUST00000162835 Pigk-003 152714106-152741164 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045029ENSMUST00000051510ENSMUST00000159899ENSMUST00000161596ENSMUST00000162835
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045029 8.835±2.40 6.215±1.51 3.261±0.00 N/A 4.372±0.70 3.267±0.61 2.240±0.20 5.640±0.71 5.526±1.56 3.624±1.12 N/A 5.111±1.23 4.214±1.00 9.307±3.71
ENSMUST00000051510 N/A N/A 3.456±0.56 29.392±0.00 N/A N/A N/A N/A 3.127±1.02 N/A N/A 16.821±7.59 13.942±8.90 14.857±0.00
ENSMUST00000159899 4.166±1.04 4.643±2.00 1.310±0.14 4.989±2.05 1.468±0.38 2.570±0.81 1.141±0.21 2.647±0.11 1.530±0.34 2.965±0.85 3.181±1.07 3.520±2.39 2.048±0.60 1.205±0.27
ENSMUST00000161596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.012±0.16
ENSMUST00000162835 N/A 7.004±0.82 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00048N CIL_00048N_0002 CGP 3:152462815-152980408
CIL_00048M CIL_00048M_0002 CGP 3:152714100-152982246

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003923 IEA GPI-anchor transamidase activity
GO:0004197 IEA cysteine-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0006508 IEA proteolysis
GO:0016020 IEA membrane
GO:0016255 IEA attachment of GPI anchor to protein
GO:0042765 IEA GPI-anchor transamidase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024479 pigk phosphatidylinositol glycan, class K protein_coding Danio_rerio
ENSG00000142892 PIGK phosphatidylinositol glycan anchor biosynthesis, class K protein_coding Homo_sapiens

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