C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphatidylinositol glycan anchor biosynthesis, class K
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162642 Pigk-006 ENSMUSG00000039047 10090 + 3:152714113-152842921 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00048N CIL_00048N_0002 CGP 3:152462815-152980408
CIL_00048M CIL_00048M_0002 CGP 3:152714100-152982246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003923 IEA GPI-anchor transamidase activity
GO:0004197 IEA cysteine-type endopeptidase activity
GO:0006508 IEA proteolysis
GO:0016255 IEA attachment of GPI anchor to protein
GO:0042765 IEA GPI-anchor transamidase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000028906 pigk-001 protein_coding Danio_rerio 0 523
ENST00000359130 PIGK-003 protein_coding Homo_sapiens 0 1020
ENST00000370812 PIGK-001 protein_coding Homo_sapiens 0 1061
ENST00000445065 PIGK-002 protein_coding Homo_sapiens 0 704
ENST00000478391 PIGK-005 processed_transcript Homo_sapiens 0 643
ENST00000487906 PIGK-004 nonsense_mediated_decay Homo_sapiens 0 573

Loading