C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class K
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159899 Pigk-001 ENSMUSG00000039047 10090 + 3:152714100-152788898 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000159899
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000159899 4.166±1.04 4.643±2.00 1.310±0.14 4.989±2.05 1.468±0.38 2.570±0.81 1.141±0.21 2.647±0.11 1.530±0.34 2.965±0.85 3.181±1.07 3.520±2.39 2.048±0.60 1.205±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00048N CIL_00048N_0002 CGP 3:152462815-152980408
CIL_00048M CIL_00048M_0002 CGP 3:152714100-152982246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003923 ISS GPI-anchor transamidase activity
GO:0004197 IEA cysteine-type endopeptidase activity
GO:0006508 IEA proteolysis
GO:0016255 IEA attachment of GPI anchor to protein
GO:0042765 ISS GPI-anchor transamidase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000028906 pigk-001 protein_coding Danio_rerio 0 523
ENST00000359130 PIGK-003 protein_coding Homo_sapiens 0 1020
ENST00000370812 PIGK-001 protein_coding Homo_sapiens 0 1192
ENST00000445065 PIGK-002 protein_coding Homo_sapiens 0 837
ENST00000478391 PIGK-005 processed_transcript Homo_sapiens 0 643
ENST00000487906 PIGK-004 nonsense_mediated_decay Homo_sapiens 0 704

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