C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, MYND-type containing 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039671 Zmynd8 10090 - 2:165784152-165899016 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018050 Zmynd8-014 165785282-165884772 protein_coding
  ENSMUST00000088113 Zmynd8-007 165785519-165884874 protein_coding
  ENSMUST00000099084 Zmynd8-015 165784155-165882278 protein_coding
  ENSMUST00000109262 Zmynd8-010 165827182-165896950 protein_coding
  ENSMUST00000109266 Zmynd8-201 165784152-165858173 protein_coding
  ENSMUST00000109269 Zmynd8-001 165785309-165878437 protein_coding
  ENSMUST00000124085 Zmynd8-002 165874877-165884239 retained_intron
  ENSMUST00000134557 Zmynd8-018 165875155-165876190 retained_intron
  ENSMUST00000136842 Zmynd8-011 165840041-165899016 protein_coding
  ENSMUST00000139202 Zmynd8-004 165845744-165852122 processed_transcript
  ENSMUST00000139907 Zmynd8-016 165842783-165862005 processed_transcript
  ENSMUST00000144530 Zmynd8-012 165852033-165876408 protein_coding
  ENSMUST00000146204 Zmynd8-003 165852034-165879902 processed_transcript
  ENSMUST00000148674 Zmynd8-006 165875257-165884751 retained_intron
  ENSMUST00000149369 Zmynd8-017 165833351-165858173 processed_transcript
  ENSMUST00000150564 Zmynd8-005 165873027-165884210 processed_transcript
  ENSMUST00000150871 Zmynd8-008 165852033-165876600 processed_transcript
  ENSMUST00000152682 Zmynd8-009 165785309-165884648 processed_transcript
  ENSMUST00000153655 Zmynd8-013 165827129-165875777 protein_coding
  ENSMUST00000170272 Zmynd8-202 165784155-165882278 protein_coding
  ENSMUST00000177633 Zmynd8-203 165784152-165884751 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018050ENSMUST00000088113ENSMUST00000099084ENSMUST00000109262ENSMUST00000109266ENSMUST00000109269ENSMUST00000152682ENSMUST00000153655ENSMUST00000177633
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018050 N/A N/A N/A N/A N/A N/A N/A N/A 0.718±0.00 N/A N/A 3.498±0.27 N/A N/A
ENSMUST00000088113 N/A N/A N/A N/A 2.221±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000099084 1.798±0.37 4.061±0.85 1.662±0.00 4.956±1.61 1.491±0.10 1.746±0.00 N/A 1.659±0.27 0.553±0.00 2.305±0.18 1.032±0.00 3.725±0.09 N/A 0.183±0.00
ENSMUST00000109262 N/A N/A N/A N/A N/A N/A N/A N/A 1.929±0.88 N/A N/A N/A N/A N/A
ENSMUST00000109266 1.939±0.70 2.791±0.53 5.389±0.22 4.124±1.05 3.994±1.52 4.475±0.67 N/A 2.869±1.14 2.273±1.34 4.000±1.72 0.968±0.25 4.763±1.84 4.575±2.04 0.507±0.20
ENSMUST00000109269 N/A N/A N/A N/A 0.568±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152682 N/A N/A N/A N/A N/A N/A N/A N/A 0.699±0.00 N/A N/A N/A N/A N/A
ENSMUST00000153655 3.737±0.58 N/A 5.368±0.19 N/A 3.575±0.26 6.173±1.14 3.702±0.85 5.106±0.86 4.174±3.17 6.699±0.47 1.355±0.00 4.532±0.00 5.682±0.78 0.558±0.17
ENSMUST00000177633 1.793±0.65 5.461±1.34 3.331±0.12 4.392±1.95 3.194±1.90 6.532±3.47 N/A 2.976±0.11 3.986±2.78 3.176±0.00 0.678±0.29 5.890±2.41 5.608±1.72 0.286±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DE CIL_0004DE_0002 CGP 2:165595032-165899016
CIL_0008NW CIL_0008NW_0002 VISTA 2:165614396-166214787
CIL_0006IW CIL_0006IW_0003 CGP 2:165784152-166073242

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007601 zmynd8 zinc finger, MYND-type containing 8 protein_coding Danio_rerio
ENSDARG00000011932 prkcbp1l protein kinase C binding protein 1, like protein_coding Danio_rerio
ENSG00000101040 ZMYND8 zinc finger, MYND-type containing 8 protein_coding Homo_sapiens

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