C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, MYND-type containing 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109266 Zmynd8-201 ENSMUSG00000039671 10090 - 2:165784152-165858173 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109266
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109266 1.939±0.70 2.791±0.53 5.389±0.22 4.124±1.05 3.994±1.52 4.475±0.67 2.869±1.14 2.273±1.34 4.000±1.72 0.968±0.25 4.763±1.84 4.575±2.04 0.507±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DE CIL_0004DE_0002 CGP 2:165595032-165899016
CIL_0008NW CIL_0008NW_0002 VISTA 2:165614396-166214787
CIL_0006IW CIL_0006IW_0003 CGP 2:165784152-166073242

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000124510 prkcbp1l-201 protein_coding Danio_rerio 0 774
ENSDART00000005015 prkcbp1l-001 protein_coding Danio_rerio 0 774
ENSDART00000040235 zmynd8-201 protein_coding Danio_rerio 0 747
ENST00000262975 ZMYND8-013 protein_coding Homo_sapiens 0 3762
ENST00000311275 ZMYND8-007 protein_coding Homo_sapiens 0 2695
ENST00000352431 ZMYND8-015 protein_coding Homo_sapiens 0 3605
ENST00000355972 ZMYND8-201 protein_coding Homo_sapiens 0 2695
ENST00000360911 ZMYND8-001 protein_coding Homo_sapiens 0 3308
ENST00000372023 ZMYND8-202 protein_coding Homo_sapiens 0 2577
ENST00000396281 ZMYND8-203 protein_coding Homo_sapiens 0 2398
ENST00000435836 ZMYND8-003 protein_coding Homo_sapiens 0 529
ENST00000446994 ZMYND8-204 protein_coding Homo_sapiens 0 2695
ENST00000458360 ZMYND8-011 protein_coding Homo_sapiens 0 2222
ENST00000461685 ZMYND8-016 protein_coding Homo_sapiens 0 3762
ENST00000467200 ZMYND8-012 protein_coding Homo_sapiens 0 3509
ENST00000468376 ZMYND8-005 processed_transcript Homo_sapiens 0 2398
ENST00000471951 ZMYND8-014 protein_coding Homo_sapiens 0 2695
ENST00000536340 ZMYND8-205 protein_coding Homo_sapiens 0 2695
ENST00000540497 ZMYND8-206 protein_coding Homo_sapiens 0 1550
ENST00000611941 ZMYND8-207 protein_coding Homo_sapiens 0 2519
ENST00000617418 ZMYND8-208 protein_coding Homo_sapiens 0 1022
ENST00000619049 ZMYND8-209 protein_coding Homo_sapiens 0 2152

Loading