C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004DE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000064655-ENSG00000101040 CGP 9606 20:46894624-47356889
GeneTranscriptPositionBiotype
ENSG00000064655 (EYA2)
EYA transcriptional coactivator and phosphatase 2 		ENST00000317304 (EYA2-009) 46990001-47188136 protein_coding
ENST00000327619 (EYA2-005) 46894624-47188844 protein_coding
ENST00000357410 (EYA2-008) 46894624-47188844 protein_coding
ENST00000458636 (EYA2-004) 47001460-47143149 protein_coding
ENST00000471081 (EYA2-002) 46979692-46990025 processed_transcript
ENST00000475856 (EYA2-006) 47089239-47096080 processed_transcript
ENST00000479843 (EYA2-001) 46979483-46990025 processed_transcript
ENST00000497062 (EYA2-003) 46894870-47188844 protein_coding
ENST00000497428 (EYA2-007) 46978235-46990070 processed_transcript
ENST00000611592 (EYA2-201) 46894624-47188844 protein_coding
ENSG00000215450 (RP5-890O15.3)
 ENST00000400363 (RP5-890O15.3-001) 47160838-47161700 processed_pseudogene
ENSG00000226769 (GAPDHP54)
glyceraldehyde 3 phosphate dehydrogenase pseudogene 54 		ENST00000432657 (GAPDHP54-001) 46997596-46998488 processed_pseudogene
ENSG00000231119 (RP4-569M23.2)
 ENST00000413818 (RP4-569M23.2-001) 47352561-47354633 antisense
ENSG00000236028 (RP11-323C15.2)
 ENST00000414085 (RP11-323C15.2-001) 46901143-46901726 lincRNA
ENSG00000239783 (RP5-1050K3.3)
 ENST00000429337 (RP5-1050K3.3-001) 47071865-47072236 processed_pseudogene
ENSG00000273451 (RP4-569M23.4)
 ENST00000609320 (RP4-569M23.4-001) 47348137-47349142 sense_intronic
CIL_0004DE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017897-ENSMUSG00000039671 CGP 10090 2:165595032-165899016
GeneTranscriptPositionBiotype
ENSMUSG00000017897 (Eya2)
eyes absent 2 homolog (Drosophila) 		ENSMUST00000063433 (Eya2-001) 165655298-165771727 protein_coding
ENSMUST00000088132 (Eya2-201) 165595032-165771719 protein_coding
ENSMUST00000128280 (Eya2-005) 165769186-165771262 processed_transcript
ENSMUST00000128696 (Eya2-002) 165761824-165767129 processed_transcript
ENSMUST00000150638 (Eya2-004) 165713569-165766260 processed_transcript
ENSMUST00000150669 (Eya2-003) 165655318-165716069 processed_transcript
ENSMUSG00000039671 (Zmynd8)
zinc finger, MYND-type containing 8 		ENSMUST00000018050 (Zmynd8-014) 165785282-165884772 protein_coding
ENSMUST00000088113 (Zmynd8-007) 165785519-165884874 protein_coding
ENSMUST00000099084 (Zmynd8-015) 165784155-165882278 protein_coding
ENSMUST00000109262 (Zmynd8-010) 165827182-165896950 protein_coding
ENSMUST00000109266 (Zmynd8-201) 165784152-165858173 protein_coding
ENSMUST00000109269 (Zmynd8-001) 165785309-165878437 protein_coding
ENSMUST00000124085 (Zmynd8-002) 165874877-165884239 retained_intron
ENSMUST00000134557 (Zmynd8-018) 165875155-165876190 retained_intron
ENSMUST00000136842 (Zmynd8-011) 165840041-165899016 protein_coding
ENSMUST00000139202 (Zmynd8-004) 165845744-165852122 processed_transcript
ENSMUST00000139907 (Zmynd8-016) 165842783-165862005 processed_transcript
ENSMUST00000144530 (Zmynd8-012) 165852033-165876408 protein_coding
ENSMUST00000146204 (Zmynd8-003) 165852034-165879902 processed_transcript
ENSMUST00000148674 (Zmynd8-006) 165875257-165884751 retained_intron
ENSMUST00000149369 (Zmynd8-017) 165833351-165858173 processed_transcript
ENSMUST00000150564 (Zmynd8-005) 165873027-165884210 processed_transcript
ENSMUST00000150871 (Zmynd8-008) 165852033-165876600 processed_transcript
ENSMUST00000152682 (Zmynd8-009) 165785309-165884648 processed_transcript
ENSMUST00000153655 (Zmynd8-013) 165827129-165875777 protein_coding
ENSMUST00000170272 (Zmynd8-202) 165784155-165882278 protein_coding
ENSMUST00000177633 (Zmynd8-203) 165784152-165884751 protein_coding
ENSMUSG00000081758 (Gm11460)
predicted gene 11460 		ENSMUST00000118200 (Gm11460-001) 165666497-165666857 processed_pseudogene
ENSMUSG00000085274 (BC046401)
cDNA sequence BC046401 		ENSMUST00000155786 (BC046401-001) 165857684-165859034 processed_transcript
ENSMUSG00000086820 (Gm11465)
predicted gene 11465 		ENSMUST00000127942 (Gm11465-001) 165880025-165882056 antisense
ENSMUSG00000100796 (RP23-90N15.1)
predicted gene 28163 		ENSMUST00000187099 (RP23-90N15.1-001) 165601463-165601787 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DE_0001ENSG00000064655ENST00000317304ENST00000327619ENST00000357410ENST00000458636ENST00000471081ENST00000475856ENST00000479843ENST00000497062ENST00000497428ENST00000611592ENSG00000215450ENST00000400363ENSG00000226769ENST00000432657ENSG00000231119ENST00000413818ENSG00000236028ENST00000414085ENSG00000239783ENST00000429337ENSG00000273451ENST00000609320CIL_0004DE_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DE_0001ENSG00000064655ENST00000317304ENST00000327619ENST00000357410ENST00000458636ENST00000475856ENST00000497062ENST00000497428ENST00000611592ENSG00000215450ENST00000400363ENSG00000226769ENST00000432657ENSG00000231119ENST00000413818ENSG00000236028ENST00000414085ENSG00000239783ENST00000429337ENSG00000273451ENST00000609320CIL_0004DE_0002ENSMUSG00000017897ENSMUST00000063433ENSMUST00000088132ENSMUST00000128280ENSMUST00000128696ENSMUST00000150638ENSMUST00000150669ENSMUSG00000039671ENSMUST00000018050ENSMUST00000088113ENSMUST00000099084ENSMUST00000109262ENSMUST00000109266ENSMUST00000109269ENSMUST00000152682ENSMUST00000153655ENSMUST00000177633ENSMUSG00000081758ENSMUST00000118200ENSMUSG00000085274ENSMUST00000155786ENSMUSG00000086820ENSMUST00000127942ENSMUSG00000100796ENSMUST00000187099
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064655 ENST00000317304 N/A N/A 0.903±0.00 N/A 0.720±0.00 0.422±0.00 N/A 0.072±0.00 0.351±0.00 N/A 0.420±0.00 0.084±0.00 N/A N/A
ENST00000327619 N/A N/A N/A N/A N/A 0.648±0.05 N/A 1.882±0.00 N/A 3.107±0.00 N/A 0.728±0.02 4.174±1.81 N/A
ENST00000357410 0.712±0.00 1.181±0.00 N/A N/A N/A 1.591±0.00 0.106±0.06 N/A N/A 1.203±0.00 N/A N/A N/A N/A
ENST00000458636 N/A N/A 3.247±0.00 1.126±0.00 N/A N/A 0.092±0.00 N/A 0.548±0.00 1.792±0.00 N/A N/A N/A N/A
ENST00000471081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475856 N/A N/A 1.024±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497062 1.273±0.00 1.619±0.00 N/A 0.837±0.11 1.148±0.68 2.847±0.00 N/A 1.249±0.00 0.097±0.05 N/A N/A 0.999±0.79 5.130±3.60 3.356±0.72
ENST00000497428 N/A N/A N/A N/A N/A N/A 0.265±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000611592 0.939±0.00 0.510±0.00 N/A 2.359±0.00 5.889±0.00 1.265±0.00 0.517±0.00 1.180±0.00 0.300±0.06 N/A 0.859±0.00 1.075±0.00 2.923±0.00 5.549±0.00
ENSG00000215450 ENST00000400363 0.070±0.00 0.075±0.00 N/A 0.066±0.04 0.160±0.03 0.169±0.00 0.046±0.00 N/A 0.068±0.00 0.073±0.00 0.152±0.00 0.095±0.00 0.058±0.00 0.073±0.05
ENSG00000226769 ENST00000432657 N/A N/A 0.522±0.00 N/A N/A N/A N/A N/A 0.074±0.00 N/A 1.306±0.00 N/A N/A N/A
ENSG00000231119 ENST00000413818 0.036±0.00 0.135±0.00 0.272±0.00 0.155±0.01 0.077±0.05 0.141±0.11 0.288±0.24 0.396±0.14 0.062±0.02 0.168±0.00 0.076±0.02 0.102±0.06 0.039±0.01 0.077±0.03
ENSG00000236028 ENST00000414085 N/A N/A N/A N/A N/A 0.188±0.03 0.193±0.00 N/A N/A 0.426±0.10 N/A 1.036±0.00 N/A N/A
ENSG00000239783 ENST00000429337 N/A N/A N/A N/A N/A 1.630±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273451 ENST00000609320 0.028±0.00 0.193±0.00 0.249±0.00 0.241±0.00 0.055±0.00 0.744±0.00 0.321±0.00 0.182±0.07 0.024±0.00 1.108±0.00 N/A 0.065±0.04 0.051±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017897 ENSMUST00000063433 3.231±1.86 1.285±0.09 2.094±0.40 N/A 5.385±2.86 0.499±0.24 0.297±0.05 0.268±0.00 0.049±0.01 N/A N/A 6.657±3.21 0.037±0.00 N/A
ENSMUST00000088132 8.264±5.76 1.417±0.54 2.387±0.36 2.171±1.45 3.440±1.53 0.533±0.26 1.100±0.46 2.213±0.42 0.062±0.03 23.976±4.34 0.665±0.10 18.999±10.66 0.187±0.08 0.414±0.24
ENSMUST00000128280 N/A N/A N/A N/A N/A N/A N/A N/A 0.357±0.04 N/A N/A N/A N/A N/A
ENSMUST00000128696 N/A N/A N/A N/A N/A 1.714±0.00 N/A N/A 0.104±0.00 N/A N/A N/A 0.155±0.00 N/A
ENSMUST00000150638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.295±0.00 N/A N/A 0.028±0.00
ENSMUST00000150669 N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A 0.084±0.04 N/A N/A N/A 0.108±0.00 N/A
ENSMUSG00000039671 ENSMUST00000018050 N/A N/A N/A N/A N/A N/A N/A N/A 0.718±0.00 N/A N/A 3.498±0.27 N/A N/A
ENSMUST00000088113 N/A N/A N/A N/A 2.221±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000099084 1.798±0.37 4.061±0.85 1.662±0.00 4.956±1.61 1.491±0.10 1.746±0.00 N/A 1.659±0.27 0.553±0.00 2.305±0.18 1.032±0.00 3.725±0.09 N/A 0.183±0.00
ENSMUST00000109262 N/A N/A N/A N/A N/A N/A N/A N/A 1.929±0.88 N/A N/A N/A N/A N/A
ENSMUST00000109266 1.939±0.70 2.791±0.53 5.389±0.22 4.124±1.05 3.994±1.52 4.475±0.67 N/A 2.869±1.14 2.273±1.34 4.000±1.72 0.968±0.25 4.763±1.84 4.575±2.04 0.507±0.20
ENSMUST00000109269 N/A N/A N/A N/A 0.568±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152682 N/A N/A N/A N/A N/A N/A N/A N/A 0.699±0.00 N/A N/A N/A N/A N/A
ENSMUST00000153655 3.737±0.58 N/A 5.368±0.19 N/A 3.575±0.26 6.173±1.14 3.702±0.85 5.106±0.86 4.174±3.17 6.699±0.47 1.355±0.00 4.532±0.00 5.682±0.78 0.558±0.17
ENSMUST00000170272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177633 1.793±0.65 5.461±1.34 3.331±0.12 4.392±1.95 3.194±1.90 6.532±3.47 N/A 2.976±0.11 3.986±2.78 3.176±0.00 0.678±0.29 5.890±2.41 5.608±1.72 0.286±0.00
ENSMUSG00000081758 ENSMUST00000118200 0.326±0.14 N/A 0.038±0.00 0.164±0.01 0.707±0.00 N/A N/A 0.172±0.00 N/A N/A N/A 0.485±0.23 N/A 0.179±0.00
ENSMUSG00000085274 ENSMUST00000155786 0.442±0.14 0.316±0.15 0.344±0.14 0.537±0.00 0.473±0.10 0.638±0.09 0.219±0.04 0.315±0.11 0.203±0.10 0.460±0.18 0.092±0.02 0.459±0.16 0.476±0.24 0.962±0.44
ENSMUSG00000086820 ENSMUST00000127942 0.233±0.08 N/A 0.677±0.15 0.619±0.09 0.386±0.29 0.227±0.02 0.342±0.18 0.348±0.38 0.363±0.18 0.211±0.07 0.257±0.09 0.255±0.07 0.341±0.03 N/A
ENSMUSG00000100796 ENSMUST00000187099 N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A N/A 0.286±0.00 N/A N/A N/A N/A

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