C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006IW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007601-ENSDARG00000077404 CGP 7955 11:18981352-19119912
GeneTranscriptPositionBiotype
ENSDARG00000007601 (zmynd8)
zinc finger, MYND-type containing 8 		ENSDART00000040235 (zmynd8-201) 18981352-19024769 protein_coding
ENSDARG00000077404 (ncoa3)
nuclear receptor coactivator 3 		ENSDART00000110621 (ncoa3-201) 19085815-19119912 protein_coding
CIL_0006IW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101040-ENSG00000124151 CGP 9606 20:47209214-47656877
GeneTranscriptPositionBiotype
ENSG00000124151 (NCOA3)
nuclear receptor coactivator 3 		ENST00000371997 (NCOA3-002) 47501941-47655742 protein_coding
ENST00000371998 (NCOA3-003) 47501927-47653619 protein_coding
ENST00000372004 (NCOA3-001) 47501902-47656877 protein_coding
ENST00000490248 (NCOA3-004) 47622958-47624073 processed_transcript
ENST00000497292 (NCOA3-005) 47627002-47628790 processed_transcript
ENSG00000221294 (AL021394.1)
 ENST00000408367 (AL021394.1-201) 47570935-47571015 miRNA
ENSG00000224565 (RP1-148H17.1)
 ENST00000437920 (RP1-148H17.1-001) 47391929-47412327 lincRNA
ENSG00000229853 (RP5-1049G16.4)
 ENST00000448675 (RP5-1049G16.4-001) 47630266-47631438 processed_pseudogene
ENSG00000231119 (RP4-569M23.2)
 ENST00000413818 (RP4-569M23.2-001) 47352561-47354633 antisense
ENSG00000273451 (RP4-569M23.4)
 ENST00000609320 (RP4-569M23.4-001) 47348137-47349142 sense_intronic
CIL_0006IW_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039671-ENSMUSG00000027678 CGP 10090 2:165784152-166073242
GeneTranscriptPositionBiotype
ENSMUSG00000006800 (Sulf2)
sulfatase 2 		ENSMUST00000088086 (Sulf2-004) 166073920-166155285 protein_coding
ENSMUST00000109249 (Sulf2-001) 166073089-166155663 protein_coding
ENSMUST00000125503 (Sulf2-007) 166074670-166076018 retained_intron
ENSMUST00000133395 (Sulf2-005) 166132593-166154423 processed_transcript
ENSMUST00000139266 (Sulf2-006) 166093516-166154806 processed_transcript
ENSMUST00000143996 (Sulf2-003) 166074815-166078119 processed_transcript
ENSMUST00000146497 (Sulf2-002) 166074150-166155605 processed_transcript
ENSMUSG00000027678 (Ncoa3)
nuclear receptor coactivator 3 		ENSMUST00000088095 (Ncoa3-201) 165992637-166073242 protein_coding
ENSMUST00000109252 (Ncoa3-001) 165992636-166071470 protein_coding
ENSMUST00000139394 (Ncoa3-004) 166067430-166070200 retained_intron
ENSMUST00000139658 (Ncoa3-003) 166060820-166066202 retained_intron
ENSMUST00000153507 (Ncoa3-002) 166047918-166052398 processed_transcript
ENSMUSG00000039671 (Zmynd8)
zinc finger, MYND-type containing 8 		ENSMUST00000018050 (Zmynd8-014) 165785282-165884772 protein_coding
ENSMUST00000088113 (Zmynd8-007) 165785519-165884874 protein_coding
ENSMUST00000099084 (Zmynd8-015) 165784155-165882278 protein_coding
ENSMUST00000109262 (Zmynd8-010) 165827182-165896950 protein_coding
ENSMUST00000109266 (Zmynd8-201) 165784152-165858173 protein_coding
ENSMUST00000109269 (Zmynd8-001) 165785309-165878437 protein_coding
ENSMUST00000124085 (Zmynd8-002) 165874877-165884239 retained_intron
ENSMUST00000134557 (Zmynd8-018) 165875155-165876190 retained_intron
ENSMUST00000136842 (Zmynd8-011) 165840041-165899016 protein_coding
ENSMUST00000139202 (Zmynd8-004) 165845744-165852122 processed_transcript
ENSMUST00000139907 (Zmynd8-016) 165842783-165862005 processed_transcript
ENSMUST00000144530 (Zmynd8-012) 165852033-165876408 protein_coding
ENSMUST00000146204 (Zmynd8-003) 165852034-165879902 processed_transcript
ENSMUST00000148674 (Zmynd8-006) 165875257-165884751 retained_intron
ENSMUST00000149369 (Zmynd8-017) 165833351-165858173 processed_transcript
ENSMUST00000150564 (Zmynd8-005) 165873027-165884210 processed_transcript
ENSMUST00000150871 (Zmynd8-008) 165852033-165876600 processed_transcript
ENSMUST00000152682 (Zmynd8-009) 165785309-165884648 processed_transcript
ENSMUST00000153655 (Zmynd8-013) 165827129-165875777 protein_coding
ENSMUST00000170272 (Zmynd8-202) 165784155-165882278 protein_coding
ENSMUST00000177633 (Zmynd8-203) 165784152-165884751 protein_coding
ENSMUSG00000082924 (Gm11462)
predicted gene 11462 		ENSMUST00000117749 (Gm11462-001) 165959789-165960350 processed_pseudogene
ENSMUSG00000083264 (Gm11461)
predicted gene 11461 		ENSMUST00000119909 (Gm11461-001) 165925266-165925841 processed_pseudogene
ENSMUSG00000084816 (Gm11463)
predicted gene 11463 		ENSMUST00000130022 (Gm11463-001) 165976757-165985924 lincRNA
ENSMUSG00000085274 (BC046401)
cDNA sequence BC046401 		ENSMUST00000155786 (BC046401-001) 165857684-165859034 processed_transcript
ENSMUSG00000086820 (Gm11465)
predicted gene 11465 		ENSMUST00000127942 (Gm11465-001) 165880025-165882056 antisense
ENSMUSG00000087351 (Gm11464)
predicted gene 11464 		ENSMUST00000146963 (Gm11464-001) 165980726-165992517 lincRNA
ENSMUSG00000092796 (Gm22692)
predicted gene, 22692 		ENSMUST00000175055 (Gm22692-201) 165908051-165908175 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IW_0001ENSDARG00000007601ENSDART00000040235ENSDARG00000077404ENSDART00000110621CIL_0006IW_0002ENSG00000124151ENST00000371997ENST00000371998ENST00000372004ENST00000490248ENST00000497292ENSG00000221294ENST00000408367ENSG00000224565ENST00000437920ENSG00000229853ENST00000448675ENSG00000231119ENST00000413818ENSG00000273451ENST00000609320CIL_0006IW_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IW_0001ENSDARG00000007601ENSDART00000040235ENSDARG00000077404ENSDART00000110621CIL_0006IW_0002ENSG00000124151ENST00000371997ENST00000371998ENST00000372004ENSG00000221294ENST00000408367ENSG00000224565ENST00000437920ENSG00000229853ENST00000448675ENSG00000231119ENST00000413818ENSG00000273451ENST00000609320CIL_0006IW_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007601 ENSDART00000040235 N/A N/A N/A 4.304±2.68 N/A N/A 2.542±1.15 1.162±0.00 0.078±0.00 N/A 0.362±0.00 N/A N/A N/A
ENSDARG00000077404 ENSDART00000110621 N/A N/A N/A 5.482±1.11 N/A N/A 6.562±1.42 5.093±0.13 0.943±0.00 N/A 2.085±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124151 ENST00000371997 N/A N/A 2.056±0.00 0.896±0.00 N/A N/A N/A N/A 1.822±0.00 N/A N/A 3.563±0.00 N/A N/A
ENST00000371998 N/A N/A N/A N/A 3.599±0.00 3.736±0.00 1.974±0.00 1.818±0.00 4.412±0.00 7.559±0.00 2.324±1.61 5.364±0.00 N/A N/A
ENST00000372004 N/A 10.023±0.00 N/A 3.215±0.00 4.861±0.00 4.829±1.84 3.397±2.03 2.454±0.00 3.205±1.21 5.260±1.18 6.149±0.00 5.252±0.90 7.021±3.65 4.989±1.27
ENST00000490248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221294 ENST00000408367 0.319±0.00 N/A N/A N/A N/A 0.311±0.00 0.267±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000224565 ENST00000437920 N/A 0.789±0.00 N/A N/A 0.043±0.00 N/A 0.019±0.00 N/A N/A 0.077±0.00 0.256±0.00 N/A 0.058±0.00 0.036±0.00
ENSG00000229853 ENST00000448675 0.073±0.00 N/A N/A N/A 0.058±0.00 0.206±0.13 0.037±0.01 N/A 0.042±0.00 0.041±0.00 N/A 0.032±0.01 N/A 0.033±0.00
ENSG00000231119 ENST00000413818 0.036±0.00 0.135±0.00 0.272±0.00 0.155±0.01 0.077±0.05 0.141±0.11 0.288±0.24 0.396±0.14 0.062±0.02 0.168±0.00 0.076±0.02 0.102±0.06 0.039±0.01 0.077±0.03
ENSG00000273451 ENST00000609320 0.028±0.00 0.193±0.00 0.249±0.00 0.241±0.00 0.055±0.00 0.744±0.00 0.321±0.00 0.182±0.07 0.024±0.00 1.108±0.00 N/A 0.065±0.04 0.051±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006800 ENSMUST00000088086 26.716±4.61 14.219±7.13 20.571±1.10 15.820±3.43 13.287±4.49 7.824±0.00 6.489±1.52 5.553±1.30 3.462±1.68 9.201±3.55 1.512±0.32 78.041±30.86 27.025±15.74 2.018±0.14
ENSMUST00000109249 9.377±0.00 8.478±4.05 N/A N/A 12.401±1.06 6.913±0.87 N/A N/A 2.495±0.00 7.378±0.65 N/A 55.130±13.89 N/A N/A
ENSMUST00000125503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146497 N/A N/A N/A 26.274±0.00 N/A N/A N/A N/A N/A N/A N/A 140.159±0.00 49.528±7.80 3.470±0.00
ENSMUSG00000027678 ENSMUST00000088095 10.442±1.62 7.396±3.11 7.931±3.69 5.486±2.09 7.841±4.35 8.070±2.59 4.851±2.32 4.805±0.97 2.101±1.05 6.581±0.17 1.713±0.85 14.666±5.42 5.282±2.83 2.559±0.31
ENSMUST00000109252 N/A 5.003±0.42 7.570±0.00 N/A 7.389±1.94 6.324±1.24 4.320±0.00 7.161±1.17 2.625±1.04 7.669±0.89 0.796±0.10 N/A 6.162±4.04 3.184±1.22
ENSMUST00000139394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039671 ENSMUST00000018050 N/A N/A N/A N/A N/A N/A N/A N/A 0.718±0.00 N/A N/A 3.498±0.27 N/A N/A
ENSMUST00000088113 N/A N/A N/A N/A 2.221±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000099084 1.798±0.37 4.061±0.85 1.662±0.00 4.956±1.61 1.491±0.10 1.746±0.00 N/A 1.659±0.27 0.553±0.00 2.305±0.18 1.032±0.00 3.725±0.09 N/A 0.183±0.00
ENSMUST00000109262 N/A N/A N/A N/A N/A N/A N/A N/A 1.929±0.88 N/A N/A N/A N/A N/A
ENSMUST00000109266 1.939±0.70 2.791±0.53 5.389±0.22 4.124±1.05 3.994±1.52 4.475±0.67 N/A 2.869±1.14 2.273±1.34 4.000±1.72 0.968±0.25 4.763±1.84 4.575±2.04 0.507±0.20
ENSMUST00000109269 N/A N/A N/A N/A 0.568±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152682 N/A N/A N/A N/A N/A N/A N/A N/A 0.699±0.00 N/A N/A N/A N/A N/A
ENSMUST00000153655 3.737±0.58 N/A 5.368±0.19 N/A 3.575±0.26 6.173±1.14 3.702±0.85 5.106±0.86 4.174±3.17 6.699±0.47 1.355±0.00 4.532±0.00 5.682±0.78 0.558±0.17
ENSMUST00000170272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177633 1.793±0.65 5.461±1.34 3.331±0.12 4.392±1.95 3.194±1.90 6.532±3.47 N/A 2.976±0.11 3.986±2.78 3.176±0.00 0.678±0.29 5.890±2.41 5.608±1.72 0.286±0.00
ENSMUSG00000082924 ENSMUST00000117749 N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A 0.034±0.00 N/A N/A N/A 0.081±0.00 0.076±0.00
ENSMUSG00000083264 ENSMUST00000119909 0.158±0.00 N/A N/A N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A 0.146±0.00 N/A N/A
ENSMUSG00000084816 ENSMUST00000130022 N/A N/A 0.031±0.01 0.010±0.00 0.128±0.00 N/A N/A N/A 0.034±0.03 N/A 0.073±0.00 0.054±0.00 0.150±0.00 N/A
ENSMUSG00000085274 ENSMUST00000155786 0.442±0.14 0.316±0.15 0.344±0.14 0.537±0.00 0.473±0.10 0.638±0.09 0.219±0.04 0.315±0.11 0.203±0.10 0.460±0.18 0.092±0.02 0.459±0.16 0.476±0.24 0.962±0.44
ENSMUSG00000086820 ENSMUST00000127942 0.233±0.08 N/A 0.677±0.15 0.619±0.09 0.386±0.29 0.227±0.02 0.342±0.18 0.348±0.38 0.363±0.18 0.211±0.07 0.257±0.09 0.255±0.07 0.341±0.03 N/A
ENSMUSG00000087351 ENSMUST00000146963 N/A 0.261±0.11 N/A 0.101±0.00 N/A 0.145±0.00 N/A 0.071±0.00 0.283±0.00 0.111±0.00 0.060±0.00 0.130±0.05 0.159±0.03 0.135±0.06
ENSMUSG00000092796 ENSMUST00000175055 1356.651±587.59 815.109±0.00 86.404±16.59 75.089±57.88 1012.240±0.00 2150.075±229.70 990.247±110.54 1005.390±0.00 141.754±247.48 1025.878±93.71 8.833±0.00 118.628±54.18 52.025±31.38 1205.513±836.14

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