C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, MYND-type containing 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101040 ZMYND8 9606 - 20:47209214-47356889 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262975 ZMYND8-013 47210413-47356823 protein_coding
  ENST00000311275 ZMYND8-007 47209214-47355657 protein_coding
  ENST00000352431 ZMYND8-015 47210441-47356699 protein_coding
  ENST00000355972 ZMYND8-201 47209214-47356889 protein_coding
  ENST00000360911 ZMYND8-001 47209214-47356706 protein_coding
  ENST00000372023 ZMYND8-202 47209214-47356889 protein_coding
  ENST00000396281 ZMYND8-203 47209214-47356889 protein_coding
  ENST00000435836 ZMYND8-003 47291796-47356684 protein_coding
  ENST00000441977 ZMYND8-009 47310157-47348072 protein_coding
  ENST00000446894 ZMYND8-006 47310103-47351877 protein_coding
  ENST00000446994 ZMYND8-204 47209214-47356889 protein_coding
  ENST00000458360 ZMYND8-011 47210247-47356720 protein_coding
  ENST00000461685 ZMYND8-016 47210761-47356670 protein_coding
  ENST00000467200 ZMYND8-012 47210413-47298900 protein_coding
  ENST00000468376 ZMYND8-005 47237310-47319061 processed_transcript
  ENST00000471951 ZMYND8-014 47210440-47356697 protein_coding
  ENST00000536340 ZMYND8-205 47209214-47356414 protein_coding
  ENST00000540497 ZMYND8-206 47209214-47356889 protein_coding
  ENST00000611941 ZMYND8-207 47209214-47356889 protein_coding
  ENST00000617418 ZMYND8-208 47285782-47356889 protein_coding
  ENST00000619049 ZMYND8-209 47209214-47356889 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000311275ENST00000352431ENST00000360911ENST00000372023ENST00000446994ENST00000461685ENST00000467200ENST00000468376ENST00000471951ENST00000536340ENST00000540497ENST00000619049
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000311275 N/A N/A N/A 2.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.015±0.00
ENST00000352431 N/A N/A N/A 3.669±0.00 N/A N/A 0.665±0.00 N/A 0.974±0.00 1.278±0.00 N/A N/A N/A N/A
ENST00000360911 N/A 2.890±0.00 N/A 1.539±0.00 N/A N/A 1.412±1.26 4.402±0.00 1.194±0.00 1.329±0.00 1.269±0.00 4.285±2.11 1.802±0.56 3.597±1.57
ENST00000372023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.835±0.00 N/A
ENST00000446994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.212±0.00 N/A N/A N/A
ENST00000461685 N/A N/A N/A N/A 2.202±0.00 N/A N/A 0.747±0.00 N/A N/A N/A N/A N/A 3.039±0.00
ENST00000467200 3.829±0.00 N/A 0.817±0.00 N/A N/A 2.847±0.00 1.465±0.00 N/A N/A 0.840±0.00 1.094±0.00 3.501±1.62 3.370±2.11 4.298±1.60
ENST00000468376 N/A N/A 0.613±0.00 N/A 2.314±0.00 1.415±0.00 0.511±0.00 N/A N/A 1.011±0.00 N/A N/A N/A N/A
ENST00000471951 N/A N/A N/A N/A N/A N/A 0.212±0.00 0.223±0.00 N/A 1.625±0.00 N/A N/A N/A N/A
ENST00000536340 N/A 3.655±0.00 N/A N/A 1.746±0.52 N/A N/A 0.412±0.00 N/A N/A N/A 1.658±0.92 1.370±0.00 N/A
ENST00000540497 N/A N/A N/A N/A 0.767±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619049 N/A N/A N/A N/A 0.841±0.00 1.120±0.00 N/A N/A N/A 1.085±0.00 0.713±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DE CIL_0004DE_0001 CGP 20:46894624-47356889
CIL_0008NW CIL_0008NW_0001 VISTA 20:47083832-47684912
CIL_0006IW CIL_0006IW_0002 CGP 20:47209214-47656877

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0001106 ISS RNA polymerase II transcription corepressor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 ISS nucleus
GO:0008270 IEA zinc ion binding
GO:0070491 ISS repressing transcription factor binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007601 zmynd8 zinc finger, MYND-type containing 8 protein_coding Danio_rerio
ENSDARG00000011932 prkcbp1l protein kinase C binding protein 1, like protein_coding Danio_rerio
ENSMUSG00000039671 Zmynd8 zinc finger, MYND-type containing 8 protein_coding Mus_musculus

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