C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear protein localization 4 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039703 Nploc4 10090 - 11:120380370-120437708 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044271 Nploc4-001 120380370-120437708 protein_coding
  ENSMUST00000103017 Nploc4-002 120380370-120437708 protein_coding
  ENSMUST00000132519 Nploc4-003 120404265-120421457 processed_transcript
  ENSMUST00000136095 Nploc4-004 120413640-120416931 processed_transcript
  ENSMUST00000137041 Nploc4-005 120382318-120383503 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044271ENSMUST00000103017ENSMUST00000132519ENSMUST00000137041
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044271 24.758±1.93 26.068±4.93 14.046±3.64 24.669±1.73 24.473±3.35 20.244±3.22 14.843±1.10 17.389±2.90 19.498±6.26 19.719±0.66 19.659±2.12 28.693±7.09 15.794±5.70 26.515±13.04
ENSMUST00000103017 N/A 4.794±0.72 N/A 5.580±0.00 4.097±0.00 N/A N/A N/A N/A N/A N/A 8.408±1.29 N/A 5.237±0.35
ENSMUST00000132519 N/A N/A N/A 8.177±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 12.796±5.44 N/A
ENSMUST00000137041 N/A N/A N/A N/A N/A 23.138±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BK CIL_0003BK_0002 CGP 11:120369055-120437708
CIL_0002HY CIL_0002HY_0002 CGP 11:120380370-120446950

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005783 ISS endoplasmic reticulum
GO:0007030 ISS Golgi organization
GO:0008270 IEA zinc ion binding
GO:0030433 ISS ER-associated ubiquitin-dependent protein catabolic process
GO:0042175 ISS nuclear outer membrane-endoplasmic reticulum membrane network
GO:0061025 ISS membrane fusion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071393 nploc4 nuclear protein localization 4 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000182446 NPLOC4 nuclear protein localization 4 homolog (S. cerevisiae) protein_coding Homo_sapiens

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