C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002HY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182446-ENSG00000182612 CGP 9606 17:81556887-81648749
GeneTranscriptPositionBiotype
ENSG00000182446 (NPLOC4)
nuclear protein localization 4 homolog (S. cerevisiae)
ENST00000331134 (NPLOC4-001) 81556887-81637146 protein_coding
ENST00000374747 (NPLOC4-002) 81561766-81637060 protein_coding
ENST00000570300 (NPLOC4-013) 81608811-81648465 processed_transcript
ENST00000570324 (NPLOC4-014) 81604572-81613402 nonsense_mediated_decay
ENST00000571562 (NPLOC4-011) 81612679-81613347 processed_transcript
ENST00000571714 (NPLOC4-017) 81559182-81572073 protein_coding
ENST00000572346 (NPLOC4-006) 81559064-81566985 processed_transcript
ENST00000572351 (NPLOC4-015) 81588091-81597319 processed_transcript
ENST00000572760 (NPLOC4-004) 81558789-81566602 protein_coding
ENST00000572824 (NPLOC4-008) 81559268-81569083 protein_coding
ENST00000573212 (NPLOC4-018) 81559316-81569102 nonsense_mediated_decay
ENST00000573328 (NPLOC4-012) 81604609-81608912 retained_intron
ENST00000573519 (NPLOC4-016) 81559091-81569064 protein_coding
ENST00000573876 (NPLOC4-005) 81559125-81566635 protein_coding
ENST00000574095 (NPLOC4-009) 81636397-81637110 processed_transcript
ENST00000574344 (NPLOC4-010) 81604664-81614381 processed_transcript
ENST00000574897 (NPLOC4-003) 81564909-81637079 nonsense_mediated_decay
ENST00000574964 (NPLOC4-019) 81559014-81560889 processed_transcript
ENST00000576713 (NPLOC4-007) 81559396-81572108 retained_intron
ENST00000576940 (NPLOC4-020) 81564213-81567495 processed_transcript
ENSG00000207021 (Y_RNA)
Y RNA
ENST00000384294 (Y_RNA.1-668) 81573490-81573602 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0002HY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039703-ENSMUSG00000039691 CGP 10090 11:120380370-120446950
GeneTranscriptPositionBiotype
ENSMUSG00000039691 (Tspan10)
tetraspanin 10
ENSMUST00000044105 (Tspan10-001) 120442644-120446950 protein_coding
ENSMUST00000143192 (Tspan10-002) 120442671-120444305 processed_transcript
ENSMUSG00000039703 (Nploc4)
nuclear protein localization 4 homolog (S. cerevisiae)
ENSMUST00000044271 (Nploc4-001) 120380370-120437708 protein_coding
ENSMUST00000103017 (Nploc4-002) 120380370-120437708 protein_coding
ENSMUST00000132519 (Nploc4-003) 120404265-120421457 processed_transcript
ENSMUST00000136095 (Nploc4-004) 120413640-120416931 processed_transcript
ENSMUST00000137041 (Nploc4-005) 120382318-120383503 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002HY_0001ENSG00000182446ENST00000331134ENST00000374747ENST00000570300ENST00000570324ENST00000571562ENST00000571714ENST00000572346ENST00000572351ENST00000572760ENST00000572824ENST00000573212ENST00000573328ENST00000573519ENST00000573876ENST00000574095ENST00000574344ENST00000574897ENST00000574964ENST00000576713ENST00000576940ENSG00000207021ENST00000384294CIL_0002HY_0002ENSMUSG00000039691ENSMUST00000044105ENSMUST00000143192ENSMUSG00000039703ENSMUST00000044271ENSMUST00000103017ENSMUST00000132519ENSMUST00000136095ENSMUST00000137041
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002HY_0001ENSG00000182446ENST00000331134ENST00000374747ENST00000573328ENST00000574897ENSG00000207021ENST00000384294CIL_0002HY_0002ENSMUSG00000039691ENSMUST00000044105ENSMUST00000143192ENSMUSG00000039703ENSMUST00000044271ENSMUST00000103017ENSMUST00000132519ENSMUST00000137041
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182446 ENST00000331134 15.442±0.00 10.359±0.00 N/A 11.387±5.40 16.890±15.17 5.135±0.69 14.784±12.49 5.919±3.00 5.422±2.65 9.646±7.13 59.185±0.00 12.340±9.62 15.735±4.89 29.107±2.47
ENST00000374747 N/A 3.506±0.00 1.446±0.00 2.098±0.00 N/A 1.248±0.00 N/A 0.691±0.00 0.930±0.00 1.125±0.41 N/A 1.042±0.00 N/A N/A
ENST00000570300 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573328 N/A N/A N/A N/A N/A N/A 7.964±0.00 N/A N/A 11.809±0.00 N/A N/A N/A N/A
ENST00000573519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574897 N/A N/A N/A N/A 1.219±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207021 ENST00000384294 0.324±0.00 0.336±0.00 N/A N/A 41.387±41.06 N/A N/A N/A N/A 1.294±0.00 N/A 0.628±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039691 ENSMUST00000044105 0.032±0.02 0.036±0.02 0.010±0.00 0.026±0.00 1.109±0.70 0.151±0.05 0.083±0.06 0.066±0.06 0.027±0.02 0.026±0.01 0.054±0.02 0.073±0.03 0.054±0.04 0.131±0.08
ENSMUST00000143192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A
ENSMUSG00000039703 ENSMUST00000044271 24.758±1.93 26.068±4.93 14.046±3.64 24.669±1.73 24.473±3.35 20.244±3.22 14.843±1.10 17.389±2.90 19.498±6.26 19.719±0.66 19.659±2.12 28.693±7.09 15.794±5.70 26.515±13.04
ENSMUST00000103017 N/A 4.794±0.72 N/A 5.580±0.00 4.097±0.00 N/A N/A N/A N/A N/A N/A 8.408±1.29 N/A 5.237±0.35
ENSMUST00000132519 N/A N/A N/A 8.177±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 12.796±5.44 N/A
ENSMUST00000136095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137041 N/A N/A N/A N/A N/A 23.138±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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