C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuronal growth regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106065 Negr1-003 ENSMUSG00000040037 10090 + 3:156561969-157199228 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106065
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106065 1.945±0.25 0.834±0.00 0.671±0.00 1.255±0.10 0.563±0.32 0.267±0.04 0.357±0.05 0.013±0.00 0.676±0.19 0.035±0.01 0.767±0.27 0.017±0.00 0.093±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WX CIL_0000WX_0002 CGP 3:156561794-157548390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 IDA plasma membrane
GO:0007626 IMP locomotory behavior
GO:0007631 IMP feeding behavior
GO:0010976 IDA positive regulation of neuron projection development
GO:0016337 IDA single organismal cell-cell adhesion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306821 NEGR1-002 protein_coding Homo_sapiens 0 979
ENST00000357731 NEGR1-001 protein_coding Homo_sapiens 0 1212
ENST00000434200 NEGR1-201 protein_coding Homo_sapiens 0 977
ENST00000467479 NEGR1-004 processed_transcript Homo_sapiens 0 632
ENST00000478526 NEGR1-003 processed_transcript Homo_sapiens 2.94273e-44 182

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