C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, MYM-type 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173954 Zmym5-001 ENSMUSG00000040123 10090 - 14:56792929-56811464 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000173954
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000173954 1.044±0.00 2.046±0.76 11.462±0.02 4.227±0.90 1.789±0.72 1.990±0.42 1.217±0.18 2.853±0.00 2.703±1.45 2.459±0.32 3.194±0.48 5.746±2.71 8.025±2.08 3.230±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000432 CIL_000432_0002 CGP 14:56722441-56811716
CIL_0003SJ CIL_0003SJ_0002 CGP 14:56790585-56962579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337963 ZMYM5-201 protein_coding Homo_sapiens 0 1299
ENST00000382871 ZMYM2-005 protein_coding Homo_sapiens 0 551
ENST00000382874 ZMYM2-003 protein_coding Homo_sapiens 0 551
ENST00000382881 ZMYM2-004 retained_intron Homo_sapiens 0 701
ENST00000382905 ZMYM5-003 protein_coding Homo_sapiens 0 664
ENST00000382909 ZMYM5-002 retained_intron Homo_sapiens 0 1068
ENST00000467542 ZMYM5-004 retained_intron Homo_sapiens 0 431
ENST00000502168 ZMYM5-006 protein_coding Homo_sapiens 0 1299
ENST00000535942 ZMYM5-007 retained_intron Homo_sapiens 0 741
ENST00000610343 ZMYM2-201 protein_coding Homo_sapiens 0 551
ENST00000610795 ZMYM2-202 protein_coding Homo_sapiens 0 551
ENST00000620447 ZMYM2-010 protein_coding Homo_sapiens 0 553

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