C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, MYM-type 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111285 Zmym5-202 ENSMUSG00000040123 10090 - 14:56790588-56811716 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000111285
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000111285 1.534±0.78 1.591±0.00 1.152±0.11 2.549±0.00 1.472±1.06 0.377±0.04 0.745±0.00 0.667±0.17 0.745±0.00 1.716±1.20 1.030±0.53 0.430±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000432 CIL_000432_0002 CGP 14:56722441-56811716
CIL_0003SJ CIL_0003SJ_0002 CGP 14:56790585-56962579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337963 ZMYM5-201 protein_coding Homo_sapiens 0 1299
ENST00000382871 ZMYM2-005 protein_coding Homo_sapiens 0 551
ENST00000382874 ZMYM2-003 protein_coding Homo_sapiens 0 551
ENST00000382881 ZMYM2-004 retained_intron Homo_sapiens 0 701
ENST00000382905 ZMYM5-003 protein_coding Homo_sapiens 0 664
ENST00000382909 ZMYM5-002 retained_intron Homo_sapiens 0 1068
ENST00000467542 ZMYM5-004 retained_intron Homo_sapiens 0 431
ENST00000502168 ZMYM5-006 protein_coding Homo_sapiens 0 1299
ENST00000535942 ZMYM5-007 retained_intron Homo_sapiens 0 741
ENST00000610343 ZMYM2-201 protein_coding Homo_sapiens 0 551
ENST00000610795 ZMYM2-202 protein_coding Homo_sapiens 0 551
ENST00000620447 ZMYM2-010 protein_coding Homo_sapiens 0 553

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