C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanylate binding protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090127 Gbp5-201 ENSMUSG00000040264 10090 + 3:142496934-142522344 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090127
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090127 2.640±0.91 0.625±0.17 8.248±1.61 0.234±0.26 2.171±0.33 0.522±0.05 0.993±0.06 0.749±0.33 0.330±0.21 1.422±0.17 1.189±0.13 0.895±0.51 0.303±0.32 0.197±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091X CIL_00091X_0002 VISTA 3:141937411-142539503
CIL_000033 CIL_000033_000D CGP 3:142496934-142619179

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0016020 IEA membrane
GO:0031410 IDA cytoplasmic vesicle
GO:0042802 IEA identical protein binding
GO:0071346 IDA cellular response to interferon-gamma

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370459 GBP5-001 protein_coding Homo_sapiens 0 977
ENST00000370466 GBP2-002 protein_coding Homo_sapiens 0 542
ENST00000370473 GBP1-001 protein_coding Homo_sapiens 0 688
ENST00000443807 GBP5-002 protein_coding Homo_sapiens 0 939
ENST00000464839 GBP2-001 nonsense_mediated_decay Homo_sapiens 0 542
ENST00000469194 GBP1-002 processed_transcript Homo_sapiens 1e-35 154

Loading