C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00091X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1438 VISTA 9606 4:94368294-94970308
GeneTranscriptPositionBiotype
ENSG00000163110 (PDLIM5)
PDZ and LIM domain 5 		ENST00000317968 (PDLIM5-001) 94451902-94668223 protein_coding
ENST00000318007 (PDLIM5-201) 94451857-94588216 protein_coding
ENST00000359265 (PDLIM5-004) 94451886-94457184 protein_coding
ENST00000380176 (PDLIM5-009) 94584401-94665481 processed_transcript
ENST00000380180 (PDLIM5-202) 94451857-94588216 protein_coding
ENST00000437932 (PDLIM5-203) 94451857-94668227 protein_coding
ENST00000503974 (PDLIM5-005) 94451935-94666552 protein_coding
ENST00000504489 (PDLIM5-003) 94451942-94456164 protein_coding
ENST00000506632 (PDLIM5-012) 94585627-94657547 nonsense_mediated_decay
ENST00000508216 (PDLIM5-008) 94455245-94588127 protein_coding
ENST00000508531 (PDLIM5-006) 94523831-94582999 processed_transcript
ENST00000509333 (PDLIM5-014) 94451928-94573735 retained_intron
ENST00000509357 (PDLIM5-015) 94523724-94618152 nonsense_mediated_decay
ENST00000510099 (PDLIM5-013) 94489035-94575938 processed_transcript
ENST00000511586 (PDLIM5-007) 94579221-94618191 processed_transcript
ENST00000511767 (PDLIM5-018) 94455267-94549986 processed_transcript
ENST00000512274 (PDLIM5-002) 94451920-94455542 protein_coding
ENST00000513341 (PDLIM5-016) 94523725-94587286 protein_coding
ENST00000514743 (PDLIM5-010) 94455245-94665501 protein_coding
ENST00000514830 (PDLIM5-017) 94451908-94582835 processed_transcript
ENST00000542407 (PDLIM5-204) 94451857-94668227 protein_coding
ENST00000615540 (PDLIM5-205) 94451857-94668227 protein_coding
ENSG00000241103 (RP11-398J16.1)
 ENST00000478069 (RP11-398J16.1-001) 94369833-94370163 processed_pseudogene
ENSG00000249599 (BMPR1B-AS1)
BMPR1B antisense RNA 1 (head to head) 		ENST00000510795 (BMPR1B-AS1-001) 94743800-94757533 lincRNA
ENSG00000249951 (RP11-554D13.1)
 ENST00000514304 (RP11-554D13.1-001) 94675245-94702570 lincRNA
ENSG00000279272 (AC109925.1)
 ENST00000624707 (AC109925.1-201) 94450651-94450892 pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00091X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1438 VISTA 10090 3:141937411-142539503
GeneTranscriptPositionBiotype
ENSMUSG00000028273 (Pdlim5)
PDZ and LIM domain 5 		ENSMUST00000029941 (Pdlim5-201) 142239586-142395696 protein_coding
ENSMUST00000058626 (Pdlim5-202) 142303328-142395696 protein_coding
ENSMUST00000090134 (Pdlim5-203) 142302080-142395696 protein_coding
ENSMUST00000168967 (Pdlim5-204) 142302080-142395696 protein_coding
ENSMUST00000170361 (Pdlim5-205) 142302080-142391850 protein_coding
ENSMUSG00000040253 (Gbp7)
guanylate binding protein 7 		ENSMUST00000045097 (Gbp7-201) 142530342-142550083 protein_coding
ENSMUST00000171263 (Gbp7-202) 142530338-142550083 protein_coding
ENSMUSG00000040264 (Gbp5)
guanylate binding protein 5 		ENSMUST00000029936 (Gbp5-001) 142594847-142619179 protein_coding
ENSMUST00000090127 (Gbp5-201) 142496934-142522344 protein_coding
ENSMUSG00000052430 (Bmpr1b)
bone morphogenetic protein receptor, type 1B 		ENSMUST00000029948 (Bmpr1b-001) 141837136-141982264 protein_coding
ENSMUST00000098568 (Bmpr1b-005) 141840367-142169213 protein_coding
ENSMUST00000106230 (Bmpr1b-004) 141840368-142169425 protein_coding
ENSMUST00000106232 (Bmpr1b-003) 141838102-141931523 protein_coding
ENSMUST00000131273 (Bmpr1b-002) 141840320-141931508 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00091X_0001ENSG00000163110ENST00000317968ENST00000318007ENST00000359265ENST00000380176ENST00000380180ENST00000437932ENST00000503974ENST00000504489ENST00000506632ENST00000508216ENST00000508531ENST00000509333ENST00000509357ENST00000510099ENST00000511586ENST00000511767ENST00000512274ENST00000513341ENST00000514743ENST00000514830ENST00000542407ENST00000615540ENSG00000241103ENST00000478069ENSG00000249599ENST00000510795ENSG00000249951ENST00000514304ENSG00000279272ENST00000624707CIL_00091X_0002ENSMUSG00000028273ENSMUST00000029941ENSMUST00000058626ENSMUST00000090134ENSMUST00000168967ENSMUST00000170361ENSMUSG00000040253ENSMUST00000045097ENSMUST00000171263ENSMUSG00000040264ENSMUST00000029936ENSMUST00000090127ENSMUSG00000052430ENSMUST00000029948ENSMUST00000098568ENSMUST00000106230ENSMUST00000106232ENSMUST00000131273
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00091X_0001ENSG00000163110ENST00000317968ENST00000318007ENST00000437932ENST00000503974ENST00000508216ENST00000542407ENST00000615540ENSG00000241103ENST00000478069ENSG00000249599ENST00000510795ENSG00000249951ENST00000514304ENSG00000279272ENST00000624707CIL_00091X_0002ENSMUSG00000028273ENSMUST00000029941ENSMUST00000058626ENSMUST00000090134ENSMUST00000168967ENSMUST00000170361ENSMUSG00000040253ENSMUST00000045097ENSMUST00000171263ENSMUSG00000040264ENSMUST00000029936ENSMUST00000090127ENSMUSG00000052430ENSMUST00000029948ENSMUST00000098568ENSMUST00000106230ENSMUST00000106232ENSMUST00000131273
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163110 ENST00000317968 4.342±0.00 N/A 6.766±0.00 2.015±0.22 6.863±1.42 7.347±2.07 N/A 18.018±0.00 10.629±0.00 9.605±3.66 N/A 6.671±3.92 11.166±2.35 N/A
ENST00000318007 N/A N/A N/A N/A 6.197±0.00 N/A N/A N/A N/A N/A 53.255±1.75 N/A N/A N/A
ENST00000359265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437932 2.570±0.00 N/A N/A N/A 1.982±0.00 N/A N/A 7.049±0.00 N/A N/A N/A N/A 3.317±0.00 9.194±0.00
ENST00000503974 7.921±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.959±0.00 5.588±0.00 4.310±0.00
ENST00000504489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508216 N/A N/A N/A N/A 5.184±0.00 N/A 110.335±35.50 N/A N/A 5.241±0.00 58.163±28.59 N/A N/A N/A
ENST00000508531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542407 N/A N/A N/A 3.818±0.00 N/A N/A N/A 8.021±0.00 6.976±0.00 N/A N/A 6.735±0.00 5.776±0.00 3.355±0.16
ENST00000615540 N/A N/A N/A N/A N/A N/A 30.109±15.04 N/A N/A N/A N/A N/A N/A N/A
ENSG00000241103 ENST00000478069 N/A 0.047±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249599 ENST00000510795 N/A N/A N/A 0.233±0.00 N/A N/A N/A 0.998±0.00 N/A 0.161±0.00 N/A 0.125±0.06 N/A 10.917±4.30
ENSG00000249951 ENST00000514304 N/A 0.099±0.00 N/A N/A N/A 0.289±0.00 0.086±0.00 N/A N/A N/A 0.659±0.00 N/A N/A N/A
ENSG00000279272 ENST00000624707 2.130±0.00 3.099±0.00 N/A 2.134±0.00 3.620±0.00 1.456±0.00 1.888±0.00 1.604±0.00 0.511±0.00 1.399±0.00 N/A 2.782±2.38 N/A 1.452±0.64
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028273 ENSMUST00000029941 14.999±0.74 15.525±1.56 18.419±2.32 2.612±0.98 16.330±2.98 17.222±1.04 8.635±0.31 19.455±1.19 11.528±3.92 18.929±1.68 N/A 12.768±2.63 18.630±5.51 2.424±1.15
ENSMUST00000058626 N/A N/A N/A N/A N/A N/A 133.479±27.59 N/A N/A 11.584±0.00 N/A N/A N/A 1.023±0.00
ENSMUST00000090134 N/A N/A N/A N/A 12.021±0.00 N/A N/A N/A N/A N/A 141.465±12.27 N/A N/A N/A
ENSMUST00000168967 N/A 4.015±0.34 N/A N/A 13.670±4.11 5.774±1.62 N/A N/A N/A N/A N/A 4.021±0.48 N/A 0.481±0.36
ENSMUST00000170361 N/A N/A N/A N/A N/A N/A 103.545±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040253 ENSMUST00000045097 N/A 2.608±1.00 N/A N/A 2.732±1.09 0.444±0.00 N/A 0.518±0.00 0.642±0.15 N/A N/A 1.306±0.54 N/A 0.110±0.06
ENSMUST00000171263 3.972±0.32 1.381±0.32 5.169±1.61 0.205±0.12 2.485±0.81 1.006±0.35 1.448±0.24 1.830±0.16 1.899±0.96 4.139±0.56 1.961±0.31 2.239±1.72 1.875±1.42 0.155±0.00
ENSMUSG00000040264 ENSMUST00000029936 0.076±0.03 0.062±0.02 0.963±0.00 0.066±0.00 0.428±0.12 0.376±0.17 0.025±0.00 0.085±0.06 0.261±0.27 0.093±0.04 0.013±0.00 0.137±0.08 0.027±0.02 0.024±0.01
ENSMUST00000090127 2.640±0.91 0.625±0.17 8.248±1.61 0.234±0.26 2.171±0.33 0.522±0.05 0.993±0.06 0.749±0.33 0.330±0.21 1.422±0.17 1.189±0.13 0.895±0.51 0.303±0.32 0.197±0.10
ENSMUSG00000052430 ENSMUST00000029948 N/A 0.034±0.00 0.112±0.00 0.618±0.24 0.064±0.01 0.062±0.02 0.038±0.02 0.690±0.15 0.020±0.01 0.369±0.25 0.819±0.32 1.980±1.48 0.013±0.00 0.056±0.02
ENSMUST00000098568 0.063±0.00 N/A N/A N/A 0.053±0.02 0.060±0.02 0.182±0.05 0.373±0.00 N/A N/A N/A N/A 0.018±0.00 N/A
ENSMUST00000106230 N/A 0.075±0.00 N/A N/A N/A N/A N/A N/A N/A 0.355±0.00 N/A 1.468±0.29 N/A 0.084±0.03
ENSMUST00000106232 0.013±0.00 0.038±0.01 N/A 0.625±0.00 0.036±0.00 N/A 0.043±0.03 N/A 0.009±0.00 N/A N/A 2.354±1.38 0.007±0.00 0.041±0.00
ENSMUST00000131273 N/A N/A N/A N/A N/A 0.046±0.01 N/A N/A N/A N/A N/A N/A N/A N/A

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