C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BTB and CNC homology 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040270 Bach2 10090 + 4:32238804-32586108 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037416 Bach2-002 32238950-32581199 protein_coding
  ENSMUST00000108180 Bach2-001 32238804-32586104 protein_coding
  ENSMUST00000125263 Bach2-006 32574931-32579838 processed_transcript
  ENSMUST00000146748 Bach2-005 32501505-32502626 processed_transcript
  ENSMUST00000149201 Bach2-003 32239077-32501636 processed_transcript
  ENSMUST00000156430 Bach2-004 32247764-32317229 processed_transcript
  ENSMUST00000171600 Bach2-201 32417435-32586108 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037416ENSMUST00000108180ENSMUST00000171600
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037416 N/A N/A N/A N/A 1.422±0.00 0.576±0.02 0.293±0.00 N/A 0.620±0.00 N/A N/A 0.488±0.21 0.369±0.00 0.809±0.17
ENSMUST00000108180 0.931±0.49 0.194±0.00 0.484±0.09 5.693±0.98 2.418±0.88 0.319±0.11 0.239±0.12 0.476±0.22 0.421±0.27 1.649±0.51 0.370±0.13 0.412±0.15 0.334±0.20 N/A
ENSMUST00000171600 N/A 0.371±0.10 0.191±0.00 3.371±2.18 2.268±0.32 0.606±0.15 0.119±0.00 0.357±0.25 0.527±0.29 1.067±0.36 0.168±0.06 0.905±0.37 0.687±0.43 0.160±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MG CIL_0008MG_0002 VISTA 4:32001903-32605410

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001206 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004074 bach2b BTB and CNC homology 1, basic leucine zipper transcription factor 2b protein_coding Danio_rerio
ENSG00000112182 BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 protein_coding Homo_sapiens

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