C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BTB and CNC homology 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108180 Bach2-001 ENSMUSG00000040270 10090 + 4:32238804-32586104 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000108180
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000108180 0.931±0.49 0.194±0.00 0.484±0.09 5.693±0.98 2.418±0.88 0.319±0.11 0.239±0.12 0.476±0.22 0.421±0.27 1.649±0.51 0.370±0.13 0.412±0.15 0.334±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MG CIL_0008MG_0002 VISTA 4:32001903-32605410

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001206 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257749 BACH2-003 protein_coding Homo_sapiens 0 3834
ENST00000343122 BACH2-005 protein_coding Homo_sapiens 0 3975
ENST00000406998 BACH2-002 protein_coding Homo_sapiens 0 750
ENST00000453877 BACH2-007 protein_coding Homo_sapiens 0 621
ENST00000470301 BACH2-001 processed_transcript Homo_sapiens 0 250
ENST00000472023 BACH2-008 processed_transcript Homo_sapiens 3e-30 135
ENST00000481150 BACH2-009 processed_transcript Homo_sapiens 0 324
ENST00000493201 BACH2-006 processed_transcript Homo_sapiens 4e-33 145
ENST00000537989 BACH2-201 protein_coding Homo_sapiens 0 3964

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