C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BTB and CNC homology 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171600 Bach2-201 ENSMUSG00000040270 10090 + 4:32417435-32586108 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171600
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171600 0.371±0.10 0.191±0.00 3.371±2.18 2.268±0.32 0.606±0.15 0.119±0.00 0.357±0.25 0.527±0.29 1.067±0.36 0.168±0.06 0.905±0.37 0.687±0.43 0.160±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MG CIL_0008MG_0002 VISTA 4:32001903-32605410

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001206 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257749 BACH2-003 protein_coding Homo_sapiens 0 3742
ENST00000343122 BACH2-005 protein_coding Homo_sapiens 0 3742
ENST00000406998 BACH2-002 protein_coding Homo_sapiens 0 531
ENST00000453877 BACH2-007 protein_coding Homo_sapiens 0 531
ENST00000481150 BACH2-009 processed_transcript Homo_sapiens 0 324
ENST00000537989 BACH2-201 protein_coding Homo_sapiens 0 3742

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