C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: aquarius
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040383 Aqr 10090 - 2:114101170-114187024 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043160 Aqr-001 114101170-114175339 protein_coding
  ENSMUST00000102543 Aqr-004 114105162-114175277 protein_coding
  ENSMUST00000125460 Aqr-005 114133368-114175246 processed_transcript
  ENSMUST00000126701 Aqr-009 114132987-114141143 processed_transcript
  ENSMUST00000129504 Aqr-003 114158599-114175338 processed_transcript
  ENSMUST00000131785 Aqr-002 114152743-114175338 processed_transcript
  ENSMUST00000140441 Aqr-006 114112126-114119187 processed_transcript
  ENSMUST00000147191 Aqr-007 114170045-114181048 processed_transcript
  ENSMUST00000154317 Aqr-008 114170045-114187024 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043160ENSMUST00000102543
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043160 9.643±2.58 16.511±1.90 7.214±0.80 10.990±5.47 11.426±2.99 10.474±1.42 4.123±0.97 8.598±1.70 7.550±3.63 12.215±0.72 2.504±0.48 14.336±4.07 8.003±2.83 6.068±2.65
ENSMUST00000102543 N/A N/A N/A N/A N/A N/A 0.893±0.14 N/A N/A N/A 0.437±0.02 4.332±1.66 6.713±0.00 1.422±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VH CIL_0008VH_0002 VISTA 2:113823388-114423882
CIL_0006HF CIL_0006HF_0002 CGP 2:114047282-114187024
CIL_0006HG CIL_0006HG_0002 CGP 2:114101170-114201469

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000398 IEA mRNA splicing, via spliceosome
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005681 IEA spliceosomal complex
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding
GO:0071013 IEA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016775 aqr aquarius homolog (mouse) protein_coding Danio_rerio
ENSG00000021776 AQR aquarius intron-binding spliceosomal factor protein_coding Homo_sapiens

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