C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aquarius
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043160 Aqr-001 ENSMUSG00000040383 10090 - 2:114101170-114175339 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043160
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043160 9.643±2.58 16.511±1.90 7.214±0.80 10.990±5.47 11.426±2.99 10.474±1.42 4.123±0.97 8.598±1.70 7.550±3.63 12.215±0.72 2.504±0.48 14.336±4.07 8.003±2.83 6.068±2.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VH CIL_0008VH_0002 VISTA 2:113823388-114423882
CIL_0006HF CIL_0006HF_0002 CGP 2:114047282-114187024
CIL_0006HG CIL_0006HG_0002 CGP 2:114101170-114201469

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000398 IEA mRNA splicing, via spliceosome
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding
GO:0071013 IEA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000156471 AQR-001 protein_coding Homo_sapiens 0 5025
ENST00000543879 AQR-002 nonsense_mediated_decay Homo_sapiens 0 3995

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