C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 21988
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040904 Gm21988 10090 - 11:70235206-70239830 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000176116 Gm21988-001 70235206-70239830 nonsense_mediated_decay
  ENSMUST00000176268 Gm21988-002 70235250-70239803 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000176116
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000176116 11.356±0.00 10.543±0.00 5.731±0.78 7.873±1.45 7.876±0.00 5.640±1.83 5.320±1.12 15.939±0.31 5.533±1.25 5.297±0.47 7.957±0.00 6.978±0.93 5.292±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SP CIL_0006SP_0003 CGP 11:70235206-70239830

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004521 IEA endoribonuclease activity
GO:0005575 ND cellular_component
GO:0009303 IEA rRNA transcription
GO:0016021 IEA integral component of membrane
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069336 rnasekb ribonuclease, RNase K b protein_coding Danio_rerio
ENSG00000219200 RNASEK ribonuclease, RNase K protein_coding Homo_sapiens

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