C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, Na+/K+ transporting, alpha 3 polypeptide
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040907 Atp1a3 10090 - 7:24978167-25005957 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000080882 Atp1a3-001 24978167-25005937 protein_coding
  ENSMUST00000102858 Atp1a3-002 24978167-25005895 protein_coding
  ENSMUST00000125444 Atp1a3-005 25000571-25005957 retained_intron
  ENSMUST00000146595 Atp1a3-003 24992177-25005907 retained_intron
  ENSMUST00000154077 Atp1a3-004 24998659-25001197 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080882ENSMUST00000102858ENSMUST00000125444ENSMUST00000146595ENSMUST00000154077
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080882 2.961±0.23 56.430±6.16 0.310±0.09 330.184±341.58 6.500±1.59 0.619±0.28 0.415±0.14 0.522±0.12 0.226±0.18 2.277±0.13 0.078±0.04 8.487±5.96 0.371±0.19 0.080±0.03
ENSMUST00000102858 N/A N/A 0.027±0.00 N/A N/A N/A N/A 0.062±0.00 0.043±0.01 0.313±0.07 N/A 1.168±0.00 N/A N/A
ENSMUST00000125444 N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A 0.625±0.00
ENSMUST00000146595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.00
ENSMUST00000154077 N/A N/A N/A N/A N/A N/A N/A N/A 0.161±0.05 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030U CIL_00030U_0002 CGP 7:24969750-25005957
CIL_0003YN CIL_0003YN_0002 CGP 7:24978167-25072369

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005391 ISS sodium:potassium-exchanging ATPase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0005794 ISS Golgi apparatus
GO:0005886 ISS plasma membrane
GO:0005890 IEA sodium:potassium-exchanging ATPase complex
GO:0006754 IEA ATP biosynthetic process
GO:0006813 IEA potassium ion transport
GO:0006814 IEA sodium ion transport
GO:0006883 IEA cellular sodium ion homeostasis
GO:0007613 IMP memory
GO:0008344 IMP adult locomotory behavior
GO:0008542 IMP visual learning
GO:0010107 IEA potassium ion import
GO:0016021 IEA integral component of membrane
GO:0030007 IEA cellular potassium ion homeostasis
GO:0030424 IEA axon
GO:0031748 IEA D1 dopamine receptor binding
GO:0031982 IEA vesicle
GO:0035235 IMP ionotropic glutamate receptor signaling pathway
GO:0035725 IEA sodium ion transmembrane transport
GO:0036376 IEA sodium ion export from cell
GO:0042493 IMP response to drug
GO:0043209 IEA myelin sheath
GO:0044326 IEA dendritic spine neck
GO:0044327 IEA dendritic spine head
GO:0045202 ISS synapse
GO:0046872 IEA metal ion binding
GO:0051087 IEA chaperone binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018259 atp1a3a ATPase, Na+/K+ transporting, alpha 3a polypeptide protein_coding Danio_rerio
ENSDARG00000036815 atp1a3b ATPase, Na+/K+ transporting, alpha 3b polypeptide protein_coding Danio_rerio
ENSG00000105409 ATP1A3 ATPase, Na+/K+ transporting, alpha 3 polypeptide protein_coding Homo_sapiens

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