C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 236
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041258 Zfp236 10090 - 18:82593593-82692883 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000171071 Zfp236-002 82593593-82692883 protein_coding
  ENSMUST00000182122 Zfp236-001 82597155-82692734 protein_coding
  ENSMUST00000182759 Zfp236-006 82639034-82640217 retained_intron
  ENSMUST00000182866 Zfp236-005 82680712-82691799 protein_coding
  ENSMUST00000183048 Zfp236-003 82597155-82692734 nonsense_mediated_decay
  ENSMUST00000183324 Zfp236-004 82595476-82617750 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171071ENSMUST00000182122ENSMUST00000183324
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171071 4.555±0.00 0.829±0.03 0.781±0.00 2.932±1.19 3.263±0.50 N/A 0.590±0.00 1.078±0.44 1.209±0.58 0.991±0.00 N/A 1.580±0.70 0.361±0.00 1.760±0.19
ENSMUST00000182122 3.347±1.69 3.876±1.33 2.659±0.00 2.590±0.64 4.710±1.61 3.529±0.70 1.192±0.33 2.023±1.07 1.651±0.80 3.665±1.11 0.742±0.34 6.245±1.77 3.158±1.49 5.163±1.44
ENSMUST00000183324 1.545±0.00 3.108±0.00 2.311±0.00 N/A N/A 3.116±0.64 N/A 2.147±0.00 1.488±0.40 N/A 0.611±0.00 4.099±0.56 2.061±0.65 3.448±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088F CIL_00088F_0002 VISTA 18:82587629-83190860

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding
GO:0071333 ISS cellular response to glucose stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000095890 znf236 zinc finger protein 236 protein_coding Danio_rerio
ENSG00000130856 ZNF236 zinc finger protein 236 protein_coding Homo_sapiens

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