C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 236
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171071 Zfp236-002 ENSMUSG00000041258 10090 - 18:82593593-82692883 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000171071
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000171071 4.555±0.00 0.829±0.03 0.781±0.00 2.932±1.19 3.263±0.50 0.590±0.00 1.078±0.44 1.209±0.58 0.991±0.00 1.580±0.70 0.361±0.00 1.760±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088F CIL_00088F_0002 VISTA 18:82587629-83190860

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding
GO:0071333 ISS cellular response to glucose stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000149720 znf236-001 protein_coding Danio_rerio 2e-34 154
ENST00000253159 ZNF236-001 protein_coding Homo_sapiens 0 4207
ENST00000320610 ZNF236-002 protein_coding Homo_sapiens 0 4207
ENST00000543926 ZNF236-003 nonsense_mediated_decay Homo_sapiens 0 3293
ENST00000579322 ZNF236-004 protein_coding Homo_sapiens 0 789
ENST00000583095 ZNF236-005 processed_transcript Homo_sapiens 0 370
ENST00000583488 ZNF236-008 retained_intron Homo_sapiens 0 470
ENST00000584565 ZNF236-006 processed_transcript Homo_sapiens 8e-27 122

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