C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 236
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130856 ZNF236 9606 + 18:76822607-76970727 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000253159 ZNF236-001 76824160-76970727 protein_coding
  ENST00000320610 ZNF236-002 76822607-76969918 protein_coding
  ENST00000543926 ZNF236-003 76824160-76970727 nonsense_mediated_decay
  ENST00000579322 ZNF236-004 76849199-76881482 protein_coding
  ENST00000583095 ZNF236-005 76851773-76875516 processed_transcript
  ENST00000583488 ZNF236-008 76880282-76895377 retained_intron
  ENST00000584565 ZNF236-006 76898092-76899123 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000253159ENST00000320610ENST00000543926ENST00000579322ENST00000583095ENST00000583488
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000253159 N/A N/A 0.501±0.34 N/A 0.567±0.00 N/A N/A N/A 0.821±0.00 0.302±0.00 0.409±0.00 N/A 2.094±0.00
ENST00000320610 0.575±0.00 0.453±0.00 0.409±0.23 0.525±0.08 0.439±0.00 0.272±0.04 0.866±0.00 1.252±0.00 0.357±0.00 0.402±0.05 0.864±0.22 0.498±0.34 3.284±1.44
ENST00000543926 N/A N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A N/A N/A 0.328±0.00 1.096±0.00
ENST00000579322 N/A N/A 4.283±0.00 N/A N/A N/A N/A N/A N/A N/A 3.934±0.00 N/A N/A
ENST00000583095 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.966±0.00 N/A N/A N/A
ENST00000583488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.366±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088F CIL_00088F_0001 VISTA 18:76223999-76826442
CIL_000017 CIL_000017_0002 CGP 18:76822607-77133683

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0071333 IEP cellular response to glucose stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000095890 znf236 zinc finger protein 236 protein_coding Danio_rerio
ENSMUSG00000041258 Zfp236 zinc finger protein 236 protein_coding Mus_musculus

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