C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 236
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182122 Zfp236-001 ENSMUSG00000041258 10090 - 18:82597155-82692734 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182122
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182122 3.347±1.69 3.876±1.33 2.659±0.00 2.590±0.64 4.710±1.61 3.529±0.70 1.192±0.33 2.023±1.07 1.651±0.80 3.665±1.11 0.742±0.34 6.245±1.77 3.158±1.49 5.163±1.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088F CIL_00088F_0002 VISTA 18:82587629-83190860

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000149720 znf236-001 protein_coding Danio_rerio 1e-34 154
ENST00000253159 ZNF236-001 protein_coding Homo_sapiens 0 5142
ENST00000320610 ZNF236-002 protein_coding Homo_sapiens 0 5216
ENST00000543926 ZNF236-003 nonsense_mediated_decay Homo_sapiens 0 4228
ENST00000579322 ZNF236-004 protein_coding Homo_sapiens 0 1153
ENST00000583095 ZNF236-005 processed_transcript Homo_sapiens 0 370
ENST00000583488 ZNF236-008 retained_intron Homo_sapiens 0 470
ENST00000584565 ZNF236-006 processed_transcript Homo_sapiens 8e-27 122

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