C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 4930506M07 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041362 4930506M07Rik 10090 - 19:58973358-59076069 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047511 4930506M07Rik-201 58973358-59076069 protein_coding
  ENSMUST00000163821 4930506M07Rik-202 58973358-59076069 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047511ENSMUST00000163821
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047511 1.570±0.68 0.805±0.29 4.565±0.10 7.430±2.37 1.053±0.21 1.908±0.30 0.484±0.06 1.042±0.41 1.715±1.11 2.688±1.03 0.284±0.08 3.034±3.29 5.928±1.90 1.373±0.27
ENSMUST00000163821 N/A 1.089±0.43 N/A 7.234±1.93 0.801±0.00 N/A 0.199±0.07 N/A N/A N/A N/A N/A 0.904±0.00 0.766±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YJ CIL_0007YJ_0002 VISTA 19:58832961-59434097
CIL_0007ZF CIL_0007ZF_0002 VISTA 19:58834549-59435577
CIL_0004H0 CIL_0004H0_0003 CGP 19:58943425-59076069
CIL_0008H6 CIL_0008H6_0002 VISTA 19:58967128-59568278
CIL_0002OL CIL_0002OL_0002 CGP 19:58973358-59170056

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005874 ISO microtubule
GO:0019900 IEA kinase binding
GO:0030426 ISA growth cone
GO:0044295 IDA axonal growth cone
GO:0048812 IEA neuron projection morphogenesis
GO:0051899 ISA membrane depolarization
GO:2000114 IGI regulation of establishment of cell polarity
GO:2001222 IGI regulation of neuron migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039697 si:ch73-56p18.4 si:ch73-56p18.4 protein_coding Danio_rerio
ENSG00000187164 KIAA1598 KIAA1598 protein_coding Homo_sapiens

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