C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002OL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187164-ENSG00000148704 CGP 9606 10:116881482-117138301
GeneTranscriptPositionBiotype
ENSG00000148704 (VAX1)
ventral anterior homeobox 1
ENST00000277905 (VAX1-002) 117128521-117138301 protein_coding
ENST00000369206 (VAX1-001) 117133290-117138056 protein_coding
CIL_0002OL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041362-ENSMUSG00000006270 CGP 10090 19:58973358-59170056
GeneTranscriptPositionBiotype
ENSMUSG00000006270 (Vax1)
ventral anterior homeobox 1
ENSMUST00000172821 (Vax1-001) 59166187-59170056 protein_coding
ENSMUST00000173710 (Vax1-004) 59166598-59166980 processed_transcript
ENSMUSG00000041362 (4930506M07Rik)
RIKEN cDNA 4930506M07 gene
ENSMUST00000047511 (4930506M07Rik-201) 58973358-59076069 protein_coding
ENSMUST00000163821 (4930506M07Rik-202) 58973358-59076069 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OL_0001ENSG00000148704ENST00000277905ENST00000369206CIL_0002OL_0002ENSMUSG00000006270ENSMUST00000172821ENSMUST00000173710ENSMUSG00000041362ENSMUST00000047511ENSMUST00000163821
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OL_0001ENSG00000148704ENST00000277905ENST00000369206CIL_0002OL_0002ENSMUSG00000006270ENSMUST00000172821ENSMUST00000173710ENSMUSG00000041362ENSMUST00000047511ENSMUST00000163821
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148704 ENST00000277905 0.010±0.00 0.003±0.00 N/A 0.057±0.01 0.003±0.00 N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A 0.120±0.00
ENST00000369206 N/A N/A N/A 0.654±0.36 N/A N/A N/A N/A N/A N/A N/A 0.085±0.00 N/A 0.335±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006270 ENSMUST00000172821 0.028±0.00 0.073±0.02 0.012±0.00 3.772±2.46 N/A N/A N/A 0.038±0.00 0.014±0.00 0.029±0.00 0.122±0.00 0.063±0.01 0.070±0.05 0.236±0.09
ENSMUST00000173710 0.587±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.345±0.26 0.616±0.00
ENSMUSG00000041362 ENSMUST00000047511 1.570±0.68 0.805±0.29 4.565±0.10 7.430±2.37 1.053±0.21 1.908±0.30 0.484±0.06 1.042±0.41 1.715±1.11 2.688±1.03 0.284±0.08 3.034±3.29 5.928±1.90 1.373±0.27
ENSMUST00000163821 N/A 1.089±0.43 N/A 7.234±1.93 0.801±0.00 N/A 0.199±0.07 N/A N/A N/A N/A N/A 0.904±0.00 0.766±0.29

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