C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin IIIB
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112243 Myo3b-002 ENSMUSG00000042064 10090 + 2:70083074-70429198 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112243
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112243 0.494±0.48 0.024±0.02 0.011±0.00 0.232±0.00 0.046±0.02 0.004±0.00 0.462±0.08 0.002±0.00 0.163±0.00 0.003±0.00 0.411±0.18 0.017±0.02 0.109±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VY CIL_0007VY_0002 VISTA 2:69698509-70299848
CIL_0004SH CIL_0004SH_0002 CGP 2:69897246-70429198
CIL_0004SG CIL_0004SG_0002 CGP 2:70039126-70477729

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 IDA microfilament motor activity
GO:0001750 IDA photoreceptor outer segment
GO:0001917 IDA photoreceptor inner segment
GO:0003779 IEA actin binding
GO:0004674 IDA protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0007601 IEA visual perception
GO:0016459 IEA myosin complex
GO:0018105 IDA peptidyl-serine phosphorylation
GO:0018107 IDA peptidyl-threonine phosphorylation
GO:0032426 IDA stereocilium bundle tip
GO:0032433 IPI filopodium tip
GO:0046777 IDA protein autophosphorylation
GO:0050896 IEA response to stimulus
GO:0051491 IPI positive regulation of filopodium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000006636 myo3a-201 protein_coding Danio_rerio 2e-26 126
ENSDART00000136041 myo3a-001 protein_coding Danio_rerio 2e-26 126
ENST00000317935 MYO3B-003 nonsense_mediated_decay Homo_sapiens 0 3622
ENST00000408978 MYO3B-004 protein_coding Homo_sapiens 0 3685
ENST00000409044 MYO3B-001 protein_coding Homo_sapiens 0 3622
ENST00000409940 MYO3B-002 retained_intron Homo_sapiens 0 3685
ENST00000438642 MYO3B-006 processed_transcript Homo_sapiens 0 3685
ENST00000442690 MYO3B-007 protein_coding Homo_sapiens 0 1212
ENST00000484338 MYO3B-005 protein_coding Homo_sapiens 0 3629
ENST00000602629 MYO3B-009 processed_transcript Homo_sapiens 0 2263

Loading