C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ELM2 and Myb/SANT-like domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042507 Elmsan1 10090 - 12:84149176-84218881 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046266 Elmsan1-201 84149176-84218881 protein_coding
  ENSMUST00000110294 Elmsan1-001 84149278-84194015 protein_coding
  ENSMUST00000130038 Elmsan1-002 84156528-84160138 processed_transcript
  ENSMUST00000137562 Elmsan1-003 84152945-84155232 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046266ENSMUST00000110294
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046266 5.260±0.43 5.637±0.84 4.435±1.36 0.947±0.00 5.864±2.71 5.422±0.97 2.269±0.42 1.727±0.50 1.749±0.65 9.642±1.07 1.361±0.63 3.947±0.81 5.543±2.89 N/A
ENSMUST00000110294 1.589±0.55 1.832±0.46 N/A 1.919±0.01 3.144±1.17 2.683±0.84 0.511±0.17 0.888±0.14 1.062±0.72 3.035±0.27 0.835±0.36 1.538±0.64 2.093±0.93 0.135±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089E CIL_00089E_0002 VISTA 12:83875691-84476743
CIL_0001TU CIL_0001TU_0002 CGP 12:84146131-84218881
CIL_0003PQ CIL_0003PQ_0002 CGP 12:84149176-84315832

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011445 ELMSAN1 (1 of 2) ELM2 and Myb/SANT-like domain containing 1 protein_coding Danio_rerio
ENSDARG00000053864 ELMSAN1 (2 of 2) ELM2 and Myb/SANT-like domain containing 1 protein_coding Danio_rerio
ENSG00000156030 ELMSAN1 ELM2 and Myb/SANT-like domain containing 1 protein_coding Homo_sapiens

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