C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001TU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176903-ENSG00000156030 CGP 9606 14:73711783-73790285
GeneTranscriptPositionBiotype
ENSG00000156030 (ELMSAN1)
ELM2 and Myb/SANT-like domain containing 1 		ENST00000286523 (ELMSAN1-201) 73715131-73760298 protein_coding
ENST00000394071 (ELMSAN1-001) 73715122-73787258 protein_coding
ENST00000421708 (ELMSAN1-008) 73739812-73755016 protein_coding
ENST00000423556 (ELMSAN1-003) 73718907-73740255 protein_coding
ENST00000435371 (ELMSAN1-002) 73719383-73760298 protein_coding
ENST00000451078 (ELMSAN1-004) 73719382-73739474 nonsense_mediated_decay
ENST00000462716 (ELMSAN1-005) 73723162-73729176 retained_intron
ENST00000476562 (ELMSAN1-006) 73715124-73727133 retained_intron
ENST00000478847 (ELMSAN1-010) 73719370-73721624 retained_intron
ENST00000483269 (ELMSAN1-009) 73722366-73725339 retained_intron
ENST00000486739 (ELMSAN1-007) 73740031-73790285 processed_transcript
ENSG00000176903 (PNMA1)
paraneoplastic Ma antigen 1 		ENST00000316836 (PNMA1-001) 73711783-73714372 protein_coding
ENSG00000259065 (RP5-1021I20.1)
 ENST00000553470 (RP5-1021I20.1-002) 73788965-73803270 antisense
ENST00000556194 (RP5-1021I20.1-001) 73787360-73803217 antisense
ENSG00000264741 (MIR4505)
microRNA 4505 		ENST00000582238 (MIR4505-201) 73758747-73758819 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0001TU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054383-ENSMUSG00000042507 CGP 10090 12:84146131-84218881
GeneTranscriptPositionBiotype
ENSMUSG00000042507 (Elmsan1)
ELM2 and Myb/SANT-like domain containing 1 		ENSMUST00000046266 (Elmsan1-201) 84149176-84218881 protein_coding
ENSMUST00000110294 (Elmsan1-001) 84149278-84194015 protein_coding
ENSMUST00000130038 (Elmsan1-002) 84156528-84160138 processed_transcript
ENSMUST00000137562 (Elmsan1-003) 84152945-84155232 processed_transcript
ENSMUSG00000042523 (Dnal1)
dynein, axonemal, light chain 1 		ENSMUST00000046340 (Dnal1-002) 84114371-84138457 protein_coding
ENSMUST00000123491 (Dnal1-001) 84114366-84143517 protein_coding
ENSMUST00000136159 (Dnal1-005) 84114391-84133984 protein_coding
ENSMUST00000140812 (Dnal1-006) 84135666-84137105 protein_coding
ENSMUST00000143711 (Dnal1-004) 84126904-84147498 retained_intron
ENSMUST00000143753 (Dnal1-007) 84114366-84139838 processed_transcript
ENSMUST00000156138 (Dnal1-003) 84114390-84140795 nonsense_mediated_decay
ENSMUSG00000054383 (Pnma1)
paraneoplastic antigen MA1 		ENSMUST00000061425 (Pnma1-001) 84146131-84148489 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TU_0001ENSG00000156030ENST00000286523ENST00000394071ENST00000421708ENST00000423556ENST00000435371ENST00000451078ENST00000462716ENST00000476562ENST00000478847ENST00000483269ENST00000486739ENSG00000176903ENST00000316836ENSG00000259065ENST00000553470ENST00000556194ENSG00000264741ENST00000582238CIL_0001TU_0002ENSMUSG00000042507ENSMUST00000046266ENSMUST00000110294ENSMUST00000130038ENSMUST00000137562ENSMUSG00000042523ENSMUST00000046340ENSMUST00000123491ENSMUST00000136159ENSMUST00000140812ENSMUST00000143711ENSMUST00000143753ENSMUST00000156138ENSMUSG00000054383ENSMUST00000061425
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TU_0001ENSG00000156030ENST00000286523ENST00000394071ENST00000423556ENST00000435371ENST00000451078ENST00000462716ENST00000476562ENSG00000176903ENST00000316836ENSG00000259065ENST00000553470ENST00000556194ENSG00000264741ENST00000582238CIL_0001TU_0002ENSMUSG00000042507ENSMUST00000046266ENSMUST00000110294ENSMUSG00000042523ENSMUST00000046340ENSMUST00000123491ENSMUSG00000054383ENSMUST00000061425
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156030 ENST00000286523 N/A N/A 1.134±0.00 1.566±0.30 0.916±0.00 2.466±0.00 0.498±0.00 N/A 0.784±0.18 1.359±0.00 N/A 6.671±0.00 2.088±0.00 1.095±0.00
ENST00000394071 N/A 2.112±0.00 N/A 1.508±0.00 1.233±0.70 N/A 0.651±0.00 1.289±0.00 N/A N/A N/A 0.949±0.42 1.954±0.99 2.376±0.95
ENST00000421708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423556 N/A N/A N/A N/A 1.503±0.00 N/A N/A 0.948±0.00 N/A N/A 1.047±0.00 N/A N/A N/A
ENST00000435371 N/A N/A N/A N/A N/A N/A N/A N/A 1.310±0.00 N/A 0.536±0.00 1.269±0.00 N/A N/A
ENST00000451078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.839±0.00 N/A N/A
ENST00000462716 N/A N/A 0.760±0.00 N/A 0.747±0.00 0.801±0.00 N/A N/A 0.876±0.00 0.815±0.00 N/A 0.867±0.00 N/A N/A
ENST00000476562 N/A N/A N/A N/A N/A N/A 0.554±0.00 1.206±0.00 N/A 1.573±0.00 1.215±0.00 6.280±0.00 0.522±0.00 6.646±0.00
ENST00000478847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176903 ENST00000316836 18.677±0.00 26.135±0.00 3.304±0.00 53.898±29.70 18.586±13.69 23.457±19.99 5.036±4.07 13.830±12.91 6.656±4.90 8.264±6.43 3.889±2.31 31.349±30.88 19.459±2.74 93.045±17.72
ENSG00000259065 ENST00000553470 0.553±0.00 0.942±0.00 N/A 0.889±0.00 N/A 1.710±0.00 1.493±0.85 0.429±0.00 1.434±0.00 N/A 1.673±1.44 1.388±0.70 0.866±0.52 0.613±0.00
ENST00000556194 1.123±0.00 0.179±0.00 N/A 0.152±0.02 4.347±0.00 2.488±0.00 1.274±1.13 N/A N/A 1.260±0.00 1.335±0.00 0.368±0.27 1.055±0.74 1.431±0.74
ENSG00000264741 ENST00000582238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.849±0.00 N/A 1.221±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042507 ENSMUST00000046266 5.260±0.43 5.637±0.84 4.435±1.36 0.947±0.00 5.864±2.71 5.422±0.97 2.269±0.42 1.727±0.50 1.749±0.65 9.642±1.07 1.361±0.63 3.947±0.81 5.543±2.89 N/A
ENSMUST00000110294 1.589±0.55 1.832±0.46 N/A 1.919±0.01 3.144±1.17 2.683±0.84 0.511±0.17 0.888±0.14 1.062±0.72 3.035±0.27 0.835±0.36 1.538±0.64 2.093±0.93 0.135±0.06
ENSMUST00000130038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042523 ENSMUST00000046340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.310±0.00 N/A
ENSMUST00000123491 1.974±1.13 1.955±0.56 3.606±0.39 3.924±1.39 0.726±0.17 0.855±0.09 0.967±0.41 1.235±0.67 0.221±0.11 1.482±0.74 1.418±0.10 2.425±1.59 1.282±0.37 3.280±1.48
ENSMUST00000136159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000054383 ENSMUST00000061425 N/A N/A N/A N/A 0.869±0.00 0.213±0.00 N/A 1.406±0.03 0.143±0.06 N/A N/A N/A 0.773±0.13 12.052±3.77

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