C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ELM2 and Myb/SANT-like domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000156030 ELMSAN1 9606 - 14:73715122-73790285 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000286523 ELMSAN1-201 73715131-73760298 protein_coding
  ENST00000394071 ELMSAN1-001 73715122-73787258 protein_coding
  ENST00000421708 ELMSAN1-008 73739812-73755016 protein_coding
  ENST00000423556 ELMSAN1-003 73718907-73740255 protein_coding
  ENST00000435371 ELMSAN1-002 73719383-73760298 protein_coding
  ENST00000451078 ELMSAN1-004 73719382-73739474 nonsense_mediated_decay
  ENST00000462716 ELMSAN1-005 73723162-73729176 retained_intron
  ENST00000476562 ELMSAN1-006 73715124-73727133 retained_intron
  ENST00000478847 ELMSAN1-010 73719370-73721624 retained_intron
  ENST00000483269 ELMSAN1-009 73722366-73725339 retained_intron
  ENST00000486739 ELMSAN1-007 73740031-73790285 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000286523ENST00000394071ENST00000423556ENST00000435371ENST00000451078ENST00000462716ENST00000476562
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000286523 N/A 1.134±0.00 1.566±0.30 0.916±0.00 2.466±0.00 0.498±0.00 N/A 0.784±0.18 1.359±0.00 N/A 6.671±0.00 2.088±0.00 1.095±0.00
ENST00000394071 2.112±0.00 N/A 1.508±0.00 1.233±0.70 N/A 0.651±0.00 1.289±0.00 N/A N/A N/A 0.949±0.42 1.954±0.99 2.376±0.95
ENST00000423556 N/A N/A N/A 1.503±0.00 N/A N/A 0.948±0.00 N/A N/A 1.047±0.00 N/A N/A N/A
ENST00000435371 N/A N/A N/A N/A N/A N/A N/A 1.310±0.00 N/A 0.536±0.00 1.269±0.00 N/A N/A
ENST00000451078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.839±0.00 N/A N/A
ENST00000462716 N/A 0.760±0.00 N/A 0.747±0.00 0.801±0.00 N/A N/A 0.876±0.00 0.815±0.00 N/A 0.867±0.00 N/A N/A
ENST00000476562 N/A N/A N/A N/A N/A 0.554±0.00 1.206±0.00 N/A 1.573±0.00 1.215±0.00 6.280±0.00 0.522±0.00 6.646±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089E CIL_00089E_0001 VISTA 14:73441559-74042582
CIL_0001TU CIL_0001TU_0001 CGP 14:73711783-73790285
CIL_0003PQ CIL_0003PQ_0001 CGP 14:73715122-73886827

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011445 ELMSAN1 (1 of 2) ELM2 and Myb/SANT-like domain containing 1 protein_coding Danio_rerio
ENSDARG00000053864 ELMSAN1 (2 of 2) ELM2 and Myb/SANT-like domain containing 1 protein_coding Danio_rerio
ENSMUSG00000042507 Elmsan1 ELM2 and Myb/SANT-like domain containing 1 protein_coding Mus_musculus

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