C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELM2 and Myb/SANT-like domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110294 Elmsan1-001 ENSMUSG00000042507 10090 - 12:84149278-84194015 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110294
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110294 1.589±0.55 1.832±0.46 1.919±0.01 3.144±1.17 2.683±0.84 0.511±0.17 0.888±0.14 1.062±0.72 3.035±0.27 0.835±0.36 1.538±0.64 2.093±0.93 0.135±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089E CIL_00089E_0002 VISTA 12:83875691-84476743
CIL_0001TU CIL_0001TU_0002 CGP 12:84146131-84218881
CIL_0003PQ CIL_0003PQ_0002 CGP 12:84149176-84315832

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286523 ELMSAN1-201 protein_coding Homo_sapiens 0 3661
ENST00000394071 ELMSAN1-001 protein_coding Homo_sapiens 0 3175
ENST00000423556 ELMSAN1-003 protein_coding Homo_sapiens 0 3312
ENST00000435371 ELMSAN1-002 protein_coding Homo_sapiens 0 3581
ENST00000451078 ELMSAN1-004 nonsense_mediated_decay Homo_sapiens 0 1615
ENST00000462716 ELMSAN1-005 retained_intron Homo_sapiens 0 507
ENST00000476562 ELMSAN1-006 retained_intron Homo_sapiens 0 1122
ENST00000478847 ELMSAN1-010 retained_intron Homo_sapiens 0 398
ENST00000483269 ELMSAN1-009 retained_intron Homo_sapiens 0 267

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