C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GTP binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042535 Gtpbp1 10090 + 15:79690895-79721478 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046463 Gtpbp1-201 79690895-79721478 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046463
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046463 13.626±3.12 15.889±0.71 10.990±1.86 15.293±3.78 19.032±3.47 17.606±1.30 9.509±0.73 12.817±1.16 11.701±7.93 15.915±0.60 9.045±0.45 19.822±3.31 6.375±2.08 9.539±3.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZY CIL_0001ZY_0002 CGP 15:79674250-79721478
CIL_0002XF CIL_0002XF_0002 CGP 15:79690895-79742536

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000177 ISS cytoplasmic exosome (RNase complex)
GO:0003924 ISS GTPase activity
GO:0005525 IEA GTP binding
GO:0005829 ISS cytosol
GO:0006184 ISS GTP catabolic process
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding
GO:0061014 ISS positive regulation of mRNA catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042900 gtpbp1l GTP binding protein 1, like protein_coding Danio_rerio
ENSDARG00000053467 gtpbp1 GTP binding protein 1 protein_coding Danio_rerio
ENSG00000100226 GTPBP1 GTP binding protein 1 protein_coding Homo_sapiens

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