C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuronal regeneration related protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042834 Nrep 10090 - 18:33437019-33464029 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000051087 Nrep-201 33437019-33463634 protein_coding
  ENSMUST00000168890 Nrep-202 33437019-33464029 protein_coding
  ENSMUST00000171533 Nrep-203 33437019-33463747 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051087ENSMUST00000168890ENSMUST00000171533
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051087 N/A N/A 1.965±0.61 2.599±0.00 N/A N/A 1.168±0.00 N/A 4.400±2.03 N/A 7.623±1.20 2.934±0.00 1.877±1.09 N/A
ENSMUST00000168890 4.645±2.13 10.981±0.00 3.878±2.14 11.304±0.00 48.870±0.00 2.900±0.82 7.058±3.71 2.655±0.99 4.532±2.39 3.904±0.73 48.680±4.46 7.407±2.99 3.073±1.02 0.249±0.04
ENSMUST00000171533 12.678±7.20 177.617±57.29 6.287±0.23 169.214±123.05 23.067±9.74 2.039±1.55 11.090±0.00 10.509±1.64 11.311±5.90 24.185±8.55 9.925±2.70 15.815±5.38 5.622±2.99 0.999±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004US CIL_0004US_0002 CGP 18:33199355-33464029
CIL_0008PC CIL_0008PC_0002 VISTA 18:33252065-33854381
CIL_0008TM CIL_0008TM_0002 VISTA 18:33252101-33853606

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0017015 IDA regulation of transforming growth factor beta receptor signaling pathway
GO:0031103 IEA axon regeneration
GO:0045664 IEA regulation of neuron differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000134986 NREP neuronal regeneration related protein protein_coding Homo_sapiens

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