C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuronal regeneration related protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134986 NREP 9606 - 5:111662621-111997464 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257435 NREP-003 111729296-111757258 protein_coding
  ENST00000379671 NREP-001 111728812-111757724 protein_coding
  ENST00000395634 NREP-008 111729984-111976931 protein_coding
  ENST00000419114 NREP-014 111730704-111757555 protein_coding
  ENST00000446294 NREP-005 111729316-111757470 protein_coding
  ENST00000447165 NREP-201 111729303-111756251 protein_coding
  ENST00000450761 NREP-009 111730691-111997464 protein_coding
  ENST00000453526 NREP-018 111730747-111757401 protein_coding
  ENST00000455559 NREP-010 111730806-111758218 protein_coding
  ENST00000503429 NREP-002 111734488-111757194 retained_intron
  ENST00000504018 NREP-022 111730954-111756251 retained_intron
  ENST00000505864 NREP-019 111734984-111757633 retained_intron
  ENST00000507032 NREP-013 111735496-111758042 protein_coding
  ENST00000507742 NREP-016 111730642-111757229 processed_transcript
  ENST00000508161 NREP-011 111731027-111758203 protein_coding
  ENST00000508870 NREP-017 111730868-111757643 protein_coding
  ENST00000509025 NREP-006 111669191-111757194 protein_coding
  ENST00000509427 NREP-015 111730724-111757409 protein_coding
  ENST00000509979 NREP-021 111730658-111758070 protein_coding
  ENST00000513100 NREP-012 111730932-111758094 protein_coding
  ENST00000513684 NREP-023 111755357-111757164 retained_intron
  ENST00000514515 NREP-007 111662621-111757194 nonsense_mediated_decay
  ENST00000515855 NREP-020 111730517-111757194 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000257435ENST00000379671ENST00000446294ENST00000514515
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000257435 1.943±0.00 N/A 7.420±0.00 14.596±6.21 8.644±0.00 N/A 3.364±0.79 N/A 2.395±0.00 4.006±0.00 2.506±2.12 14.620±11.40 42.214±7.30 5.825±0.66
ENST00000379671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.307±0.00 2.890±0.00 N/A 2.104±0.00
ENST00000446294 N/A 5.450±0.00 N/A 16.270±0.00 9.428±0.00 5.363±3.10 9.602±0.00 6.717±0.00 N/A N/A N/A N/A N/A 9.256±0.00
ENST00000514515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.140±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004US CIL_0004US_0001 CGP 5:111496033-111997464
CIL_0008PC CIL_0008PC_0001 VISTA 5:111547843-112153084
CIL_0008TM CIL_0008TM_0001 VISTA 5:111547866-112149626

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0017015 IEA regulation of transforming growth factor beta receptor signaling pathway
GO:0031103 IEA axon regeneration
GO:0045664 IEA regulation of neuron differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000042834 Nrep neuronal regeneration related protein protein_coding Mus_musculus

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