C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TOX high mobility group box family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043668 Tox3 10090 - 8:90247040-90348343 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000109621 Tox3-001 90247040-90348343 protein_coding
  ENSMUST00000176034 Tox3-002 90257946-90348126 protein_coding
  ENSMUST00000176616 Tox3-003 90252706-90348131 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109621ENSMUST00000176034ENSMUST00000176616
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109621 1.714±0.03 1.566±0.22 0.139±0.07 13.480±11.42 0.432±0.24 5.789±2.17 0.691±0.43 3.335±0.52 0.050±0.05 1.817±0.16 0.020±0.01 2.266±1.57 0.186±0.08 0.305±0.11
ENSMUST00000176034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A
ENSMUST00000176616 N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A 0.050±0.00 N/A 0.094±0.00 N/A 0.149±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0003 UCNEbase 8:88447800-92743752
CIL_0007X1 CIL_0007X1_0002 VISTA 8:89711558-90312979
CIL_0008J3 CIL_0008J3_0002 VISTA 8:89903841-90504770
CIL_00085C CIL_00085C_0002 VISTA 8:89913533-90514666
CIL_0008LS CIL_0008LS_0002 VISTA 8:89943821-90546886
CIL_0008J0 CIL_0008J0_0002 VISTA 8:89976086-90577206
CIL_0008J1 CIL_0008J1_0002 VISTA 8:90001584-90603038
CIL_000859 CIL_000859_0002 VISTA 8:90022237-90623493
CIL_0007WW CIL_0007WW_0002 VISTA 8:90027959-90629477
CIL_0008U8 CIL_0008U8_0002 VISTA 8:90194121-90799562
CIL_00077Q CIL_00077Q_0002 CGP 8:90247040-91054508

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 ISS chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0034056 ISS estrogen response element binding
GO:0042803 ISS protein homodimerization activity
GO:0043524 ISS negative regulation of neuron apoptotic process
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0051219 IEA phosphoprotein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073957 tox3 TOX high mobility group box family member 3 protein_coding Danio_rerio
ENSG00000103460 TOX3 TOX high mobility group box family member 3 protein_coding Homo_sapiens

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