C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044041 Krt13 10090 - 11:100117327-100121566 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000007275 Krt13-001 100117327-100121566 protein_coding
  ENSMUST00000128934 Krt13-002 100119145-100120577 processed_transcript
  ENSMUST00000134282 Krt13-003 100117901-100118834 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungOvaryPlacentaTestisENSMUST00000007275ENSMUST00000128934
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000007275 0.228±0.03 0.125±0.00 0.176±0.00 0.014±0.00 0.044±0.01 0.213±0.12 0.013±0.01 516.587±516.43 0.667±0.19 1.642±2.07 0.039±0.00
ENSMUST00000128934 N/A N/A 0.166±0.02 N/A N/A N/A 0.241±0.15 0.087±0.00 1.642±0.00 2.227±1.79 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000W CGP 11:100102007-100121566
CIL_00056U CIL_00056U_0011 CGP 11:100117327-100135928

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0007010 IEA cytoskeleton organization
GO:0009314 IEA response to radiation
GO:0043587 IEA tongue morphogenesis
GO:0045095 IEA keratin filament
GO:0045111 IEA intermediate filament cytoskeleton
GO:0070062 IEA extracellular vesicular exosome
GO:0071300 IEA cellular response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000212 zgc:92061 zgc:92061 protein_coding Danio_rerio
ENSDARG00000014356 zgc:92035 zgc:92035 protein_coding Danio_rerio
ENSDARG00000022334 BX469912.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000023082 krt1-19d keratin, type 1, gene 19d protein_coding Danio_rerio
ENSDARG00000036832 cyt1l type I cytokeratin, enveloping layer, like protein_coding Danio_rerio
ENSDARG00000036834 zgc:109868 zgc:109868 protein_coding Danio_rerio
ENSDARG00000036840 krt15 keratin 15 protein_coding Danio_rerio
ENSDARG00000044975 zgc:153629 zgc:153629 protein_coding Danio_rerio
ENSDARG00000044976 zgc:136902 zgc:136902 protein_coding Danio_rerio
ENSDARG00000090268 si:dkeyp-113d7.4 si:dkeyp-113d7.4 protein_coding Danio_rerio
ENSDARG00000092947 cyt1 type I cytokeratin, enveloping layer protein_coding Danio_rerio
ENSDARG00000094041 krt17 keratin 17 protein_coding Danio_rerio
ENSDARG00000095147 wu:fb17f05 wu:fb17f05 protein_coding Danio_rerio
ENSG00000171401 KRT13 keratin 13 protein_coding Homo_sapiens

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