C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SCAN domain-containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046229 Scand1 10090 - 2:156311847-156312704 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000079125 Scand1-201 156311847-156312704 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079125
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079125 54.818±14.91 164.858±25.10 48.827±4.25 54.780±20.68 106.251±40.10 100.665±19.32 17.840±5.86 82.970±9.28 35.197±14.55 82.540±15.72 10.018±3.13 87.266±15.44 30.234±10.10 142.586±22.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056T CIL_00056T_0002 CGP 2:156196466-156312704
CIL_0000WS CIL_0000WS_0002 CGP 2:156311847-156375638

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003713 IDA transcription coactivator activity
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000171222 SCAND1 SCAN domain containing 1 protein_coding Homo_sapiens

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