C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000WS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171222-ENSG00000149646 CGP 9606 20:35953617-36030700
GeneTranscriptPositionBiotype
ENSG00000149646 (CNBD2)
cyclic nucleotide binding domain containing 2 		ENST00000349339 (CNBD2-003) 35968607-36030700 protein_coding
ENST00000373973 (CNBD2-001) 35968590-36030700 protein_coding
ENST00000463258 (CNBD2-006) 35968623-36030669 nonsense_mediated_decay
ENST00000489667 (CNBD2-002) 35968611-35974956 protein_coding
ENST00000538900 (CNBD2-005) 35968623-36030669 protein_coding
ENST00000614708 (CNBD2-008) 35954707-35955368 protein_coding
ENST00000622112 (CNBD2-007) 35954564-35980581 protein_coding
ENSG00000171222 (SCAND1)
SCAN domain containing 1 		ENST00000305978 (SCAND1-002) 35953617-35954626 protein_coding
ENST00000373991 (SCAND1-001) 35953629-35959472 protein_coding
ENST00000615116 (SCAND1-201) 35953617-35955359 protein_coding
CIL_0000WS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046229-ENSMUSG00000038085 CGP 10090 2:156311847-156375638
GeneTranscriptPositionBiotype
ENSMUSG00000038085 (Cnbd2)
cyclic nucleotide binding domain containing 2 		ENSMUST00000037096 (Cnbd2-001) 156312299-156375635 protein_coding
ENSMUST00000073942 (Cnbd2-003) 156312592-156357102 protein_coding
ENSMUST00000109580 (Cnbd2-002) 156312633-156375638 protein_coding
ENSMUST00000125395 (Cnbd2-005) 156312578-156338665 processed_transcript
ENSMUST00000133056 (Cnbd2-004) 156312617-156320929 retained_intron
ENSMUST00000154227 (Cnbd2-006) 156333861-156339266 processed_transcript
ENSMUSG00000046229 (Scand1)
SCAN domain-containing 1 		ENSMUST00000079125 (Scand1-201) 156311847-156312704 protein_coding
ENSMUSG00000081751 (Gm14251)
predicted gene 14251 		ENSMUST00000122133 (Gm14251-001) 156322402-156322680 processed_pseudogene
ENSMUSG00000082321 (Gm14253)
predicted gene 14253 		ENSMUST00000122112 (Gm14253-001) 156347202-156347840 processed_pseudogene
ENSMUSG00000085546 (Gm14252)
predicted gene 14252 		ENSMUST00000131801 (Gm14252-001) 156332317-156339381 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000WS_0001ENSG00000149646ENST00000349339ENST00000373973ENST00000463258ENST00000489667ENST00000538900ENST00000614708ENST00000622112ENSG00000171222ENST00000305978ENST00000373991ENST00000615116CIL_0000WS_0002ENSMUSG00000038085ENSMUST00000037096ENSMUST00000073942ENSMUST00000109580ENSMUST00000125395ENSMUST00000133056ENSMUST00000154227ENSMUSG00000046229ENSMUST00000079125ENSMUSG00000081751ENSMUST00000122133ENSMUSG00000082321ENSMUST00000122112ENSMUSG00000085546ENSMUST00000131801
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000WS_0001ENSG00000149646ENST00000349339ENST00000373973ENST00000463258ENST00000489667ENST00000614708ENSG00000171222ENST00000305978ENST00000373991CIL_0000WS_0002ENSMUSG00000038085ENSMUST00000037096ENSMUST00000073942ENSMUST00000109580ENSMUSG00000046229ENSMUST00000079125ENSMUSG00000081751ENSMUST00000122133ENSMUSG00000082321ENSMUST00000122112ENSMUSG00000085546ENSMUST00000131801
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000149646 ENST00000349339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.212±0.00
ENST00000373973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.258±0.00
ENST00000463258 N/A N/A 0.165±0.00 N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000489667 N/A N/A 0.121±0.00 N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A 0.104±0.00 N/A N/A
ENST00000538900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614708 N/A N/A N/A 2.090±0.00 0.707±0.00 1.549±0.00 0.954±0.67 N/A N/A N/A N/A 2.160±0.92 N/A N/A
ENST00000622112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171222 ENST00000305978 38.621±0.00 69.184±0.00 1.102±0.00 16.863±11.39 26.196±21.61 14.541±10.47 12.822±11.55 40.014±32.85 31.709±30.14 27.244±25.21 22.205±8.22 23.693±19.65 37.087±21.97 35.294±0.00
ENST00000373991 N/A 4.791±0.00 N/A N/A 3.576±0.00 N/A N/A N/A 0.248±0.00 N/A N/A 0.866±0.00 2.936±0.79 N/A
ENST00000615116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038085 ENSMUST00000037096 N/A N/A N/A N/A N/A 17.274±0.00 1.371±0.00 N/A N/A N/A 0.622±0.21 6.700±6.16 1.185±0.53 42.558±2.58
ENSMUST00000073942 N/A N/A 4.603±0.95 N/A 0.898±0.00 N/A N/A 18.837±0.00 4.010±0.00 N/A 0.382±0.00 0.778±0.09 N/A N/A
ENSMUST00000109580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.489±0.23 N/A 19.709±0.00
ENSMUST00000125395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000046229 ENSMUST00000079125 54.818±14.91 164.858±25.10 48.827±4.25 54.780±20.68 106.251±40.10 100.665±19.32 17.840±5.86 82.970±9.28 35.197±14.55 82.540±15.72 10.018±3.13 87.266±15.44 30.234±10.10 142.586±22.23
ENSMUSG00000081751 ENSMUST00000122133 0.702±0.00 0.486±0.03 0.150±0.07 0.196±0.05 0.487±0.00 0.847±0.29 N/A 0.280±0.00 0.319±0.12 0.410±0.00 0.188±0.00 1.176±1.07 0.622±0.61 0.446±0.16
ENSMUSG00000082321 ENSMUST00000122112 0.183±0.09 0.371±0.00 0.121±0.00 0.149±0.08 0.261±0.11 0.450±0.31 0.212±0.07 0.155±0.03 0.097±0.08 0.169±0.00 0.087±0.04 0.363±0.36 0.155±0.13 0.840±0.53
ENSMUSG00000085546 ENSMUST00000131801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.122±0.00 N/A N/A

Loading